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The map label for this gene is bssR [H]

Identifier: 29142457

GI number: 29142457

Start: 2093275

End: 2093658

Strand: Reverse

Name: bssR [H]

Synonym: t2036

Alternate gene names: 29142457

Gene position: 2093658-2093275 (Counterclockwise)

Preceding gene: 29142459

Following gene: 29142456

Centisome position: 43.69

GC content: 50.0

Gene sequence:

>384_bases
ATGGTCGTTGACAGACTGAGAACCGATCTTCTCAACAAGCTGATAAACGCGCGTATCGATCTTGCCGCTTATCTGCAATT
GCGAAAAGCGAAGGGGTATATGTCAGTCAGCGAAAGTGACACTCTGCGTGACAATTTTTTTGAACTGAATCGCGAGCTCC
ACGATCACGCTTTACGGCAGGGACTGCATCTCGATCAGGAAGAGTGGAACGCGCTGCGCCGTGCCGAAGGCGCGCTTGCA
GCCGCCGCCGTTTGTTTAATGAGTGGACACCATGATTGTCCGACCTTTATTGCCGTCAACGCAGATAAACTTGAAAACTG
TCTGACAACTTTGACGCTGAGTATTCAGAGTCTGAAAGCACATTCACCGCTTACACAGGTCTGA

Upstream 100 bases:

>100_bases
GGGCAATTCTAAGAAAATTCTTGATCTCTGACACCCCTTTGTCTAAAAAACGACCATACTATTAAGTTGAACCCTGGTAG
AAAAGAGGAGGAAAAAAGGT

Downstream 100 bases:

>100_bases
ATAAGGGGGAGGCGACTCCCCCTTTTTACCGGACCGCGCCGCTTAATGTTTTGTAAAAATAAACCCGACCTCTTGCGATG
CTGACTACGCTTTAACGCAG

Product: biofilm formation regulatory protein BssR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRDNFFELNRELHDHALRQGLHLDQEEWNALRRAEGALA
AAAVCLMSGHHDCPTFIAVNADKLENCLTTLTLSIQSLKAHSPLTQV

Sequences:

>Translated_127_residues
MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRDNFFELNRELHDHALRQGLHLDQEEWNALRRAEGALA
AAAVCLMSGHHDCPTFIAVNADKLENCLTTLTLSIQSLKAHSPLTQV
>Mature_127_residues
MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRDNFFELNRELHDHALRQGLHLDQEEWNALRRAEGALA
AAAVCLMSGHHDCPTFIAVNADKLENCLTTLTLSIQSLKAHSPLTQV

Specific function: Represses biofilm formation in M9C glu and LB glu media but not in M9C and LB media. Seems to act as a global regulator of several genes involved in catabolite repression and stress response and regulation of the uptake and export of signaling pathways. C

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787059, Length=126, Percent_Identity=76.984126984127, Blast_Score=199, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020359
- ProDom:   PD079626 [H]

Pfam domain/function: PF10799 YliH [H]

EC number: NA

Molecular weight: Translated: 14267; Mature: 14267

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRDNFFELNRELHDHALRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLHLDQEEWNALRRAEGALAAAAVCLMSGHHDCPTFIAVNADKLENCLTTLTLSIQSLKA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
HSPLTQV
CCCCCCC
>Mature Secondary Structure
MVVDRLRTDLLNKLINARIDLAAYLQLRKAKGYMSVSESDTLRDNFFELNRELHDHALRQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
GLHLDQEEWNALRRAEGALAAAAVCLMSGHHDCPTFIAVNADKLENCLTTLTLSIQSLKA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHH
HSPLTQV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]