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The map label for this gene is yliI [H]

Identifier: 29142456

GI number: 29142456

Start: 2092035

End: 2093156

Strand: Reverse

Name: yliI [H]

Synonym: t2035

Alternate gene names: 29142456

Gene position: 2093156-2092035 (Counterclockwise)

Preceding gene: 29142457

Following gene: 29142454

Centisome position: 43.68

GC content: 56.15

Gene sequence:

>1122_bases
ATGCGTCGAATACTTCTCGCGATAGTTTCATTCTCTCTTTTCTCTTCATGGGCGAACGCCAATCTTGCGCCGGTGAACGT
TGAGGTGCTGCAAACCCGACTCGATCACCCGTGGTCGCTGGCTTTTTTGCCGGATAACCGTGGGATGCTCATTACCCTGA
AAGGGGGACAACTGCGCCACTGGCAGACGGGGCGGGGACTTTCCGATCCGCTGGCTGGCGTACCGAAAGTGTGGGCAAAC
GGGCAGGGAGGTTTGCTGGACGTCGTGCTGGCGCCTGATTTTGCCCAGTCGCGCCGCGTCTGGCTGAGCTATGCTGAAGC
TGACCGCGAAGGAAACGCCGGTACGGCAGCCGGCTTTGGACGGCTGAGCGACGATTTTCAGCGTCTGGAGCATTTTCGTA
CCGTGTTTCGCCAGATGCCTAAGCTGTCTACCGGCAACCATTTCGGCGGACGTATGGTATTCGATGCGCAAGGGTTTCTT
TTTATTGCCCTGGGTGAAAATAACCAGCGCGCTACCGCGCAGGATTTGGATAAATTACAGGGTAAGCTGGTGCGCCTGAC
CGGGCAGGGCGAAATTCCGCCGGATAATCCGTTTGTACATCAGGCGGGCGCGCGTCCGGAAATCTGGTCTTACGGTATTC
GTAATCCGCAGGGGCTGGCCATCAATCCCTGGAGCGGCGCGCTATGGCTGCATGAACACGGTCCGCGCGGCGGCGATGAA
ATTAACATCCCGGAAAAAGGCAAAAATTATGGCTGGCCGCTGGCCACATGGGGCGTCAACTATAGTGGTCTGAAAGTGCC
GGAAGCCAAAGGTGAAATTGTCGAGGGAACGGAGCAACCGGTTTACTACTGGAAGGATTCTCCGGCGATCAGCGGGATGG
CTTTTTATGCCAGCGACGTTTTTGCGCCGTGGCGGCACAAACTGTTTATCGGCGCGCTAAAAGATAAAGAGGTCATTGTG
ATGCGCGTCGATGGCAATACGGTGACGGAAGAAGGCCGTATTCTGGGTGACAGAAAGCAGCGTATTCGGGATGTGCGTGT
CGGACCTGACGGCTACTTATATGTGTTAACCGATGAGTCCGACGGGCAGTTACTCAAGGTAAGTCCTGCAGCCACGCGTT
AG

Upstream 100 bases:

>100_bases
CCCCTTTTTACCGGACCGCGCCGCTTAATGTTTTGTAAAAATAAACCCGACCTCTTGCGATGCTGACTACGCTTTAACGC
AGAGCCCTGAAGGAGGCGGT

Downstream 100 bases:

>100_bases
GTCACCGGGATCATCACCACTTTGCGAAAAGCAGGGCGCTCGGTAAGCTGTTGATACCAGCGTTGCAGATTCGGGCGCGG
CGTCCACTTCAGACCCACGT

Product: oxidoreductase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRRILLAIVSFSLFSSWANANLAPVNVEVLQTRLDHPWSLAFLPDNRGMLITLKGGQLRHWQTGRGLSDPLAGVPKVWAN
GQGGLLDVVLAPDFAQSRRVWLSYAEADREGNAGTAAGFGRLSDDFQRLEHFRTVFRQMPKLSTGNHFGGRMVFDAQGFL
FIALGENNQRATAQDLDKLQGKLVRLTGQGEIPPDNPFVHQAGARPEIWSYGIRNPQGLAINPWSGALWLHEHGPRGGDE
INIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYWKDSPAISGMAFYASDVFAPWRHKLFIGALKDKEVIV
MRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR

Sequences:

>Translated_373_residues
MRRILLAIVSFSLFSSWANANLAPVNVEVLQTRLDHPWSLAFLPDNRGMLITLKGGQLRHWQTGRGLSDPLAGVPKVWAN
GQGGLLDVVLAPDFAQSRRVWLSYAEADREGNAGTAAGFGRLSDDFQRLEHFRTVFRQMPKLSTGNHFGGRMVFDAQGFL
FIALGENNQRATAQDLDKLQGKLVRLTGQGEIPPDNPFVHQAGARPEIWSYGIRNPQGLAINPWSGALWLHEHGPRGGDE
INIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYWKDSPAISGMAFYASDVFAPWRHKLFIGALKDKEVIV
MRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR
>Mature_373_residues
MRRILLAIVSFSLFSSWANANLAPVNVEVLQTRLDHPWSLAFLPDNRGMLITLKGGQLRHWQTGRGLSDPLAGVPKVWAN
GQGGLLDVVLAPDFAQSRRVWLSYAEADREGNAGTAAGFGRLSDDFQRLEHFRTVFRQMPKLSTGNHFGGRMVFDAQGFL
FIALGENNQRATAQDLDKLQGKLVRLTGQGEIPPDNPFVHQAGARPEIWSYGIRNPQGLAINPWSGALWLHEHGPRGGDE
INIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYWKDSPAISGMAFYASDVFAPWRHKLFIGALKDKEVIV
MRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=212, Percent_Identity=27.3584905660377, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI187936955, Length=212, Percent_Identity=27.3584905660377, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI124248546, Length=200, Percent_Identity=27, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1787060, Length=369, Percent_Identity=77.2357723577236, Blast_Score=593, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 41367; Mature: 41367

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRILLAIVSFSLFSSWANANLAPVNVEVLQTRLDHPWSLAFLPDNRGMLITLKGGQLRH
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEEE
WQTGRGLSDPLAGVPKVWANGQGGLLDVVLAPDFAQSRRVWLSYAEADREGNAGTAAGFG
EECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCC
RLSDDFQRLEHFRTVFRQMPKLSTGNHFGGRMVFDAQGFLFIALGENNQRATAQDLDKLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHC
GKLVRLTGQGEIPPDNPFVHQAGARPEIWSYGIRNPQGLAINPWSGALWLHEHGPRGGDE
CEEEEEECCCCCCCCCCEEECCCCCCCHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCC
INIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYWKDSPAISGMAFYASDV
CCCCCCCCCCCCCEEECCCCCCCEECCCCCCCEECCCCCCEEEECCCCCCCCEEEEHHHC
FAPWRHKLFIGALKDKEVIVMRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDES
CCCCCEEEEEEEECCCEEEEEEECCCEECCCCCEECCHHHHHEEEEECCCCEEEEEEECC
DGQLLKVSPAATR
CCCEEEECCCCCC
>Mature Secondary Structure
MRRILLAIVSFSLFSSWANANLAPVNVEVLQTRLDHPWSLAFLPDNRGMLITLKGGQLRH
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCEEEEEEECCCCEEEEECCCCEEE
WQTGRGLSDPLAGVPKVWANGQGGLLDVVLAPDFAQSRRVWLSYAEADREGNAGTAAGFG
EECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCC
RLSDDFQRLEHFRTVFRQMPKLSTGNHFGGRMVFDAQGFLFIALGENNQRATAQDLDKLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHC
GKLVRLTGQGEIPPDNPFVHQAGARPEIWSYGIRNPQGLAINPWSGALWLHEHGPRGGDE
CEEEEEECCCCCCCCCCEEECCCCCCCHHCCCCCCCCCCEECCCCCEEEEEECCCCCCCC
INIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYWKDSPAISGMAFYASDV
CCCCCCCCCCCCCEEECCCCCCCEECCCCCCCEECCCCCCEEEECCCCCCCCEEEEHHHC
FAPWRHKLFIGALKDKEVIVMRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDES
CCCCCEEEEEEEECCCEEEEEEECCCEECCCCCEECCHHHHHEEEEECCCCEEEEEEECC
DGQLLKVSPAATR
CCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]