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The map label for this gene is lppB [H]

Identifier: 29141707

GI number: 29141707

Start: 1313738

End: 1313977

Strand: Reverse

Name: lppB [H]

Synonym: t1244

Alternate gene names: 29141707

Gene position: 1313977-1313738 (Counterclockwise)

Preceding gene: 29141708

Following gene: 29141700

Centisome position: 27.42

GC content: 47.08

Gene sequence:

>240_bases
ATGAACCGCACTAACAAACTGATCTTAGGTGCAGTAGTTCTGGGTTCCACGTTACTGGCAGGTTGTTCCAGCAACGCTAA
AATCGATCAGTTGTCTTCCGATGTACAGACGCTGAGCGCTAAAGTTGATCAACTGAGTAATGACGTAAATGCAATGCGTT
CCGACGTTCAGGCTGCTAAAGACGACGCAGCTCGCGCTAACCAACGTCTGGACAACAAAGTATTCCGCATCTGTAAATGA

Upstream 100 bases:

>100_bases
ACTAAATACCGTAAGTAATAGTACCTGCGTAATAAAAATGGCGCACATCGTGCGCCATTTTTTTTACCTATATAACCACA
CAAAATATAAGGTTATTGTT

Downstream 100 bases:

>100_bases
TTTGACGCATGATATAAAATGGCGCACATCGTGCGCCATTTTTTTGTCCGTCATTTACTGCGAAGGCTACTGCGTCGCGC
GCGTTTGCCCCTCTTCCCCG

Product: major outer membrane lipoprotein

Products: NA

Alternate protein names: Murein-lipoprotein 2 [H]

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK

Sequences:

>Translated_79_residues
MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK
>Mature_79_residues
MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNKVFRICK

Specific function: Interacts with the peptidoglycan both covalently and noncovalently [H]

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Cell outer membrane; Peptidoglycan-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Lpp family [H]

Homologues:

Organism=Escherichia coli, GI1787967, Length=70, Percent_Identity=91.4285714285714, Blast_Score=126, Evalue=2e-31,
Organism=Escherichia coli, GI1789390, Length=72, Percent_Identity=47.2222222222222, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006817
- InterPro:   IPR016367
- InterPro:   IPR023147 [H]

Pfam domain/function: PF04728 LPP [H]

EC number: NA

Molecular weight: Translated: 8478; Mature: 8478

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQLSNDVNAMRSDVQAAK
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDAARANQRLDNKVFRICK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRTNKLILGAVVLGSTLLAGCSSNAKIDQLSSDVQTLSAKVDQLSNDVNAMRSDVQAAK
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDAARANQRLDNKVFRICK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA