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The map label for this gene is lppA

Identifier: 29141708

GI number: 29141708

Start: 1314060

End: 1314296

Strand: Reverse

Name: lppA

Synonym: t1245

Alternate gene names: 29141708

Gene position: 1314296-1314060 (Counterclockwise)

Preceding gene: 29141709

Following gene: 29141707

Centisome position: 27.43

GC content: 51.48

Gene sequence:

>237_bases
ATGAATCGTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCTGGTTGCTCCAGCAACGCTAAAAT
CGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCG
ACGTTCAGGCTGCTAAAGACGACGCAGCTCGCGCTAACCAGCGTCTGGACAACCAGGCTACTAAATACCGTAAGTAA

Upstream 100 bases:

>100_bases
ATAAGTGCATTCCCATCAAAAAAATATTCTCAACATAAAAAAGTTTGTGTAATACTTGTAACGCTACATGGAGATTAACT
CAATCTAGAGGGTATTAATA

Downstream 100 bases:

>100_bases
TAGTACCTGCGTAATAAAAATGGCGCACATCGTGCGCCATTTTTTTTACCTATATAACCACACAAAATATAAGGTTATTG
TTATGAACCGCACTAACAAA

Product: major outer membrane lipoprotein

Products: NA

Alternate protein names: Murein-lipoprotein 1

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNQATKYRK

Sequences:

>Translated_78_residues
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNQATKYRK
>Mature_78_residues
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNQATKYRK

Specific function: Interacts with the peptidoglycan both covalently and noncovalently

COG id: COG4238

COG function: function code M; Murein lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Cell outer membrane; Peptidoglycan-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Lpp family

Homologues:

Organism=Escherichia coli, GI1787967, Length=78, Percent_Identity=96.1538461538462, Blast_Score=145, Evalue=6e-37,
Organism=Escherichia coli, GI1789390, Length=70, Percent_Identity=50, Blast_Score=75, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPP1_SALPA (Q5PH64)

Other databases:

- EMBL:   CP000026
- RefSeq:   YP_150725.1
- ProteinModelPortal:   Q5PH64
- SMR:   Q5PH64
- PRIDE:   Q5PH64
- GeneID:   3174812
- GenomeReviews:   CP000026_GR
- KEGG:   spt:SPA1476
- HOGENOM:   HBG739995
- OMA:   QAHSYRK
- ProtClustDB:   PRK15396
- BioCyc:   SENT295319:SPA1476-MONOMER
- InterPro:   IPR006817
- InterPro:   IPR016367
- InterPro:   IPR023147
- Gene3D:   G3DSA:1.20.5.190
- PIRSF:   PIRSF002855

Pfam domain/function: PF04728 LPP

EC number: NA

Molecular weight: Translated: 8392; Mature: 8392

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKD
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAARANQRLDNQATKYRK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKD
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAARANQRLDNQATKYRK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA