Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yfeO [H]
Identifier: 29140974
GI number: 29140974
Start: 523734
End: 524969
Strand: Reverse
Name: yfeO [H]
Synonym: t0453
Alternate gene names: 29140974
Gene position: 524969-523734 (Counterclockwise)
Preceding gene: 29140978
Following gene: 29140972
Centisome position: 10.96
GC content: 59.14
Gene sequence:
>1236_bases ATGTTCCACCCGCGTGCCCGAACGATGCTGCTGCTGTCGCTCCCTGCGCTGATTATTGGCGTAGCGTCAAGCCTAGTTTT AATCGCCTCGATGAAAGTCGCGTCGGTTTTTCAGCAATTTCTTTGGCAACGACTGCCCGCCAGCATCGGAATCGCTTATG ATTCGCCGTTCTGGATAGTGGGTATGCTCACGCTAACCGGGATCGTGGTGGGTTTGATTATCCGTTACAGTCCCGGACAC GCTGGCCCCGATCCGGCCATCGAACCGTTAATCAGTATGCCGGTCTCGCCATCTGCGCTGCCCGGGCTGCTTCTCGCCTT AATCATCGGCCTTGCTGGTGGGGTAAGTTTGGGGCCAGAGCATCCGATAATGACAATAAATATCGCGCTGGCGGCGGCTT TCGGCTCCCGCCTGTTTCCGCGTATCACGGCGTTAGACTGGACGATTCTGGCCTCAGCAGGCACCATCGGCGCGCTGTTC GGCACGCCCGTCGCCGCGGCGCTGATTTTTTCGCAAACGCTTAGCGGCTCTAACGATATTCCCATGTGGGATCGCCTGTT TGCGCCGTTAATGGCGGCAGCGGCGGGGTCACTCACCACCAGCCTGTTCTTTCATCCGCATTTTTCGTTACCCATCGCCC ATTACACGCAGATGCGGCTGGTGGACATTGCCAGCGGAGCGATCGTCGCGGCGATCGCCATTGCCGCCGGGATGGTCGCC GTCTGGTGCCTTCCGCGTCTGCACGAGTTGCTGCACCGACTAAAAAATCCGGTCCTGATTCTCGGCATTGGCGGTTTTAT ACTGGGTATTCTGGGCGTCATTGGCGGGCCGCTTACCCTGTTTAAAGGCCTGGACGAAATGCAACAAATGGCGTTTAGCC AGACGTTGGGCGCGGGAGATTATTTTACCTTAGCCGTCGTCAAACTCGCCGCGCTGGTCATCGCGGCGGCGAGCGGCTTT CGCGGCGGGCGCATTTTTCCGGCTGTGTTTATCGGCGCGGCGCTGGGGCTCATGCTCCATGCCCATGTTGAGGCCGTACC CGCGGCGATTACCGTCTCCTGCGCGATTCTTGGCTTAGTGCTGGTAGTGACGCGCGACGGCTGGCTCAGTCTGTTTATGG CGGCAGTCGTCGTACCGGATACCAATCTGCTGCCGCTGCTCTGCATTGTGATGCTCCCCGCCTGGCTATTGCTGGCGGGA AAACCGTTGCTGGCCGCCAACCGTCACGAACCCTAA
Upstream 100 bases:
>100_bases CTTCATCACAGAATTACTTTCTTGTTTCAGCACCAATTGCAGCAATGCCGTCGGGCAGGCTGTGCAAAATAGATATACGA CCCCGTGTAAGGAAGAGATT
Downstream 100 bases:
>100_bases TCCGGCGCAGCGGGGGCCATTATCCCCCGTTGCGGGCTTCCAGCGCCCGGGTCACGGTACGCAGTAATTCCGGCAGATCG GCTTTTGGCAACATCACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQRLPASIGIAYDSPFWIVGMLTLTGIVVGLIIRYSPGH AGPDPAIEPLISMPVSPSALPGLLLALIIGLAGGVSLGPEHPIMTINIALAAAFGSRLFPRITALDWTILASAGTIGALF GTPVAAALIFSQTLSGSNDIPMWDRLFAPLMAAAAGSLTTSLFFHPHFSLPIAHYTQMRLVDIASGAIVAAIAIAAGMVA VWCLPRLHELLHRLKNPVLILGIGGFILGILGVIGGPLTLFKGLDEMQQMAFSQTLGAGDYFTLAVVKLAALVIAAASGF RGGRIFPAVFIGAALGLMLHAHVEAVPAAITVSCAILGLVLVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLAG KPLLAANRHEP
Sequences:
>Translated_411_residues MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQRLPASIGIAYDSPFWIVGMLTLTGIVVGLIIRYSPGH AGPDPAIEPLISMPVSPSALPGLLLALIIGLAGGVSLGPEHPIMTINIALAAAFGSRLFPRITALDWTILASAGTIGALF GTPVAAALIFSQTLSGSNDIPMWDRLFAPLMAAAAGSLTTSLFFHPHFSLPIAHYTQMRLVDIASGAIVAAIAIAAGMVA VWCLPRLHELLHRLKNPVLILGIGGFILGILGVIGGPLTLFKGLDEMQQMAFSQTLGAGDYFTLAVVKLAALVIAAASGF RGGRIFPAVFIGAALGLMLHAHVEAVPAAITVSCAILGLVLVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLAG KPLLAANRHEP >Mature_411_residues MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQRLPASIGIAYDSPFWIVGMLTLTGIVVGLIIRYSPGH AGPDPAIEPLISMPVSPSALPGLLLALIIGLAGGVSLGPEHPIMTINIALAAAFGSRLFPRITALDWTILASAGTIGALF GTPVAAALIFSQTLSGSNDIPMWDRLFAPLMAAAAGSLTTSLFFHPHFSLPIAHYTQMRLVDIASGAIVAAIAIAAGMVA VWCLPRLHELLHRLKNPVLILGIGGFILGILGVIGGPLTLFKGLDEMQQMAFSQTLGAGDYFTLAVVKLAALVIAAASGF RGGRIFPAVFIGAALGLMLHAHVEAVPAAITVSCAILGLVLVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLAG KPLLAANRHEP
Specific function: Unknown
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]
Homologues:
Organism=Escherichia coli, GI1788733, Length=408, Percent_Identity=80.1470588235294, Blast_Score=596, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022969 - InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 42970; Mature: 42970
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQRLPASIGIAYDSPFWIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH GMLTLTGIVVGLIIRYSPGHAGPDPAIEPLISMPVSPSALPGLLLALIIGLAGGVSLGPE HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC HPIMTINIALAAAFGSRLFPRITALDWTILASAGTIGALFGTPVAAALIFSQTLSGSNDI CCEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC PMWDRLFAPLMAAAAGSLTTSLFFHPHFSLPIAHYTQMRLVDIASGAIVAAIAIAAGMVA CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VWCLPRLHELLHRLKNPVLILGIGGFILGILGVIGGPLTLFKGLDEMQQMAFSQTLGAGD HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC YFTLAVVKLAALVIAAASGFRGGRIFPAVFIGAALGLMLHAHVEAVPAAITVSCAILGLV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLAGKPLLAANRHEP HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MFHPRARTMLLLSLPALIIGVASSLVLIASMKVASVFQQFLWQRLPASIGIAYDSPFWIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH GMLTLTGIVVGLIIRYSPGHAGPDPAIEPLISMPVSPSALPGLLLALIIGLAGGVSLGPE HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC HPIMTINIALAAAFGSRLFPRITALDWTILASAGTIGALFGTPVAAALIFSQTLSGSNDI CCEEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC PMWDRLFAPLMAAAAGSLTTSLFFHPHFSLPIAHYTQMRLVDIASGAIVAAIAIAAGMVA CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH VWCLPRLHELLHRLKNPVLILGIGGFILGILGVIGGPLTLFKGLDEMQQMAFSQTLGAGD HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC YFTLAVVKLAALVIAAASGFRGGRIFPAVFIGAALGLMLHAHVEAVPAAITVSCAILGLV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLAGKPLLAANRHEP HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA