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The map label for this gene is yghZ [H]

Identifier: 29140972

GI number: 29140972

Start: 520884

End: 521882

Strand: Reverse

Name: yghZ [H]

Synonym: t0451

Alternate gene names: 29140972

Gene position: 521882-520884 (Counterclockwise)

Preceding gene: 29140974

Following gene: 29140971

Centisome position: 10.89

GC content: 54.35

Gene sequence:

>999_bases
ATGATTTATCAGCCCGATGAGAATCGTTATCACACAATGGAGTATCGTCGCTGCGGGCGCAGCGGCGTCAAACTTCCCGC
TATTTCGCTGGGGTTATGGCACAACTTCGGCGATACGACACGGGTAGAAAATAGCCGGGCGCTGCTGCAACGCGCGTTCG
ATCTGGGCATTACCCACTTTGATCTCGCCAATAATTATGGGCCGCCGCCGGGCTCCGCAGAATGCAATTTTGGCCGCATT
CTGCAGGAAGATTTTTTACCGTGGCGCGATGAGTTAGTCATCTCCACCAAAGCGGGCTACACCATGTGGGATGGCCCTTA
TGGCGACTGGGGTTCACGGAAATACCTTATCGCCAGCCTCGATCAAAGCCTGAAACGTATGGGGCTGGAGTATGTCGATA
TCTTTTATCACCATCGTCCCGATCCCGAAACGCCGCTTAAAGAGACGATGAAAGCGTTAGATCACCTTGTGCGCCACGGC
AAAGCGTTGTACGTGGGGATCTCTAACTATCCTGCCGATCTGGCCAGACAAGCTATCGATATTCTGGAGGATCTCGGCAC
GCCTTGCCTGATTCATCAGCCTAAATATTCGCTTTTTGAGCGTTGGGTAGAGGACGGGCTGCTGACGCTGTTGCAGGAAA
AAGGCGTCGGCAGTATTGCCTTCTCGCCGCTGGCGGGCGGGCAGCTCACTGACCGTTATCTGAATGGCATTCCGGAAGAT
TCCCGCGCGGCGAGCGGAAGCCGTTTCCTTAAACCAGAACAGATTACCGCCGACAAACTGGAAAAAGTTCGCCGGTTGAA
TGAACTGGCTGCACGACGGGGCCAAAAATTGTCTCAGATGGCGCTCGCCTGGGTGCTGCGTAACGATAACGTTACCTCGG
TACTGATTGGCGCCAGCAAACCGTCGCAAATCGAAGACGCCGTAGGAATGCTGGCCAATCGCCGTTTTTCGGCGGCGGAA
TGTGCAGAAATTGACGCTATTCTGGAGGGCCGGTTTTAG

Upstream 100 bases:

>100_bases
CCTGGAAAACAATGTTTACAGCGGCAAACAGTAAAAGCCGGATACCGCCTGGCGAGTGTAACCGTATACACTATTTATTC
ACGCCACAGGGGGAAAGGTC

Downstream 100 bases:

>100_bases
CAAAAAATGCTCTCCTTCATGATTTAAGAGTTAAGGCGATGAAACAAATCTTTACTGCTTTGTAATATTGCATTAACAGG
CCGGCGACGGCTCGATCGTG

Product: ion-channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRI
LQEDFLPWRDELVISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHG
KALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGSIAFSPLAGGQLTDRYLNGIPED
SRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAE
CAEIDAILEGRF

Sequences:

>Translated_332_residues
MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRI
LQEDFLPWRDELVISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHG
KALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGSIAFSPLAGGQLTDRYLNGIPED
SRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAE
CAEIDAILEGRF
>Mature_332_residues
MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRI
LQEDFLPWRDELVISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHG
KALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGSIAFSPLAGGQLTDRYLNGIPED
SRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAAE
CAEIDAILEGRF

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=37.1165644171779, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=37.037037037037, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI27436964, Length=329, Percent_Identity=35.5623100303951, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI27436962, Length=329, Percent_Identity=35.5623100303951, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI27436966, Length=329, Percent_Identity=35.258358662614, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI27436971, Length=326, Percent_Identity=34.0490797546012, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI41152114, Length=116, Percent_Identity=38.7931034482759, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI223718702, Length=117, Percent_Identity=36.7521367521368, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI41327764, Length=142, Percent_Identity=35.9154929577465, Blast_Score=72, Evalue=7e-13,
Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=60.1823708206687, Blast_Score=409, Evalue=1e-115,
Organism=Escherichia coli, GI87081735, Length=303, Percent_Identity=32.6732673267327, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=30.0859598853868, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788070, Length=314, Percent_Identity=28.0254777070064, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI48994888, Length=298, Percent_Identity=27.1812080536913, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=25.2365930599369, Blast_Score=72, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6325169, Length=326, Percent_Identity=26.6871165644172, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323998, Length=309, Percent_Identity=24.2718446601942, Blast_Score=76, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6319958, Length=280, Percent_Identity=25.3571428571429, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322615, Length=234, Percent_Identity=24.7863247863248, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319951, Length=253, Percent_Identity=25.296442687747, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24640980, Length=353, Percent_Identity=26.9121813031161, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI45549126, Length=353, Percent_Identity=26.9121813031161, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24646155, Length=308, Percent_Identity=26.6233766233766, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR005399
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 37399; Mature: 37399

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHF
CCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCEEE
DLANNYGPPPGSAECNFGRILQEDFLPWRDELVISTKAGYTMWDGPYGDWGSRKYLIASL
EHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCCCCCHHHHHH
DQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAID
HHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
ILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGSIAFSPLAGGQLTDRYLNGIPED
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCCCC
SRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECCC
PSQIEDAVGMLANRRFSAAECAEIDAILEGRF
CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIYQPDENRYHTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHF
CCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHCCEEE
DLANNYGPPPGSAECNFGRILQEDFLPWRDELVISTKAGYTMWDGPYGDWGSRKYLIASL
EHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCCCCCHHHHHH
DQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAID
HHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
ILEDLGTPCLIHQPKYSLFERWVEDGLLTLLQEKGVGSIAFSPLAGGQLTDRYLNGIPED
HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCCCC
SRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECCC
PSQIEDAVGMLANRRFSAAECAEIDAILEGRF
CHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]