Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572414

Identifier: 28572414

GI number: 28572414

Start: 285371

End: 286027

Strand: Direct

Name: 28572414

Synonym: TW255

Alternate gene names: NA

Gene position: 285371-286027 (Clockwise)

Preceding gene: 28572413

Following gene: 28572415

Centisome position: 30.82

GC content: 47.79

Gene sequence:

>657_bases
TTGTTTCGTTACACACTGCGGGGTAATGTTCCGCTAAGGGGTCCTGTTATCATCGTTGCAAATCACAATAGTGAACTAGA
TCCGATTTTATTTGCGATAGCTATTTGGCGCATGGGTCGAAAGCCATATTTTATGGCGAAGCGTCAGTTATTTTCCGTGC
CTGCCTTAGGTGCATGCCTGAGGTTCTTGCGGCAGATTCCTGTTACCCGACCCTCTGATACGCCATGTGGTGATATGACA
GAAAATACACACGCGCCTTCACTCTTGACAGCTATCAGGCGCCTTCGTGCCGGGGGAGTTATTGTGCTTTATCCCGAAGG
GTCTGTTACACGGCATCCCGAGCTGTGGCTTGACAGTTTCAATCCGGGATTTGTTCATTTGGCAAGCCTAACAGGCACAC
CCATTATTTGTGCGGCCCAGTGGGGTGCACAGAAAACTCTTCCTTATGGAAAAAAGTTACCAAAATTTGGGCTGCGCAAT
GCGTACAGTGTTGTATTTTGTGCCCCGGTGCATATTCCGAGAAAAAGGCTGTCAGATGAGGAGATTAAGCGCTTCAGTAA
CCTGATGAAGGAAAAAATTAATACAGCCCTTGCAGCTATCAGGTTATCCGATGAGACAGGCTTCATGCGACATGAAAGAG
GGTGGGTTGCGCAATAA

Upstream 100 bases:

>100_bases
AGCTTGAAAGATTGAAAGTTGATTTTGAGGCATGAAGGAAACGCGTTTGCCTTCGCGCTTTTGGGTTTTTACGTTTCTTA
TCAATCCCCTTGTGCGGCTC

Downstream 100 bases:

>100_bases
AGTCGCTGTTATAGGTTCTGGATCATGGGGGACCGCCATTGCCAATCTGCTTTGTAAGGCGGGGAATGAAACTATTCTAT
GGGGCAGGGATGAAAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase Putayive; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferases; 2-Acylglycerophosphoethanolamine Acyltransferase; Acyltransferase Family Protein; Acyltransferase Domain Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACLRFLRQIPVTRPSDTPCGDMT
ENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSFNPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRN
AYSVVFCAPVHIPRKRLSDEEIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ

Sequences:

>Translated_218_residues
MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACLRFLRQIPVTRPSDTPCGDMT
ENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSFNPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRN
AYSVVFCAPVHIPRKRLSDEEIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ
>Mature_218_residues
MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACLRFLRQIPVTRPSDTPCGDMT
ENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSFNPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRN
AYSVVFCAPVHIPRKRLSDEEIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24536; Mature: 24536

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACL
CEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
RFLRQIPVTRPSDTPCGDMTENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSF
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHEECCC
NPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRNAYSVVFCAPVHIPRKRLSDE
CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHH
EIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCCCC
>Mature Secondary Structure
MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACL
CEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
RFLRQIPVTRPSDTPCGDMTENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSF
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHEECCC
NPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRNAYSVVFCAPVHIPRKRLSDE
CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHH
EIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA