Definition | Tropheryma whipplei TW08/27, complete genome. |
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Accession | NC_004551 |
Length | 925,938 |
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The map label for this gene is 28572414
Identifier: 28572414
GI number: 28572414
Start: 285371
End: 286027
Strand: Direct
Name: 28572414
Synonym: TW255
Alternate gene names: NA
Gene position: 285371-286027 (Clockwise)
Preceding gene: 28572413
Following gene: 28572415
Centisome position: 30.82
GC content: 47.79
Gene sequence:
>657_bases TTGTTTCGTTACACACTGCGGGGTAATGTTCCGCTAAGGGGTCCTGTTATCATCGTTGCAAATCACAATAGTGAACTAGA TCCGATTTTATTTGCGATAGCTATTTGGCGCATGGGTCGAAAGCCATATTTTATGGCGAAGCGTCAGTTATTTTCCGTGC CTGCCTTAGGTGCATGCCTGAGGTTCTTGCGGCAGATTCCTGTTACCCGACCCTCTGATACGCCATGTGGTGATATGACA GAAAATACACACGCGCCTTCACTCTTGACAGCTATCAGGCGCCTTCGTGCCGGGGGAGTTATTGTGCTTTATCCCGAAGG GTCTGTTACACGGCATCCCGAGCTGTGGCTTGACAGTTTCAATCCGGGATTTGTTCATTTGGCAAGCCTAACAGGCACAC CCATTATTTGTGCGGCCCAGTGGGGTGCACAGAAAACTCTTCCTTATGGAAAAAAGTTACCAAAATTTGGGCTGCGCAAT GCGTACAGTGTTGTATTTTGTGCCCCGGTGCATATTCCGAGAAAAAGGCTGTCAGATGAGGAGATTAAGCGCTTCAGTAA CCTGATGAAGGAAAAAATTAATACAGCCCTTGCAGCTATCAGGTTATCCGATGAGACAGGCTTCATGCGACATGAAAGAG GGTGGGTTGCGCAATAA
Upstream 100 bases:
>100_bases AGCTTGAAAGATTGAAAGTTGATTTTGAGGCATGAAGGAAACGCGTTTGCCTTCGCGCTTTTGGGTTTTTACGTTTCTTA TCAATCCCCTTGTGCGGCTC
Downstream 100 bases:
>100_bases AGTCGCTGTTATAGGTTCTGGATCATGGGGGACCGCCATTGCCAATCTGCTTTGTAAGGCGGGGAATGAAACTATTCTAT GGGGCAGGGATGAAAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase Putayive; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferases; 2-Acylglycerophosphoethanolamine Acyltransferase; Acyltransferase Family Protein; Acyltransferase Domain Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACLRFLRQIPVTRPSDTPCGDMT ENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSFNPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRN AYSVVFCAPVHIPRKRLSDEEIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ
Sequences:
>Translated_218_residues MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACLRFLRQIPVTRPSDTPCGDMT ENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSFNPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRN AYSVVFCAPVHIPRKRLSDEEIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ >Mature_218_residues MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACLRFLRQIPVTRPSDTPCGDMT ENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSFNPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRN AYSVVFCAPVHIPRKRLSDEEIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24536; Mature: 24536
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACL CEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH RFLRQIPVTRPSDTPCGDMTENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSF HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHEECCC NPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRNAYSVVFCAPVHIPRKRLSDE CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHH EIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCCCC >Mature Secondary Structure MFRYTLRGNVPLRGPVIIVANHNSELDPILFAIAIWRMGRKPYFMAKRQLFSVPALGACL CEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH RFLRQIPVTRPSDTPCGDMTENTHAPSLLTAIRRLRAGGVIVLYPEGSVTRHPELWLDSF HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHEECCC NPGFVHLASLTGTPIICAAQWGAQKTLPYGKKLPKFGLRNAYSVVFCAPVHIPRKRLSDE CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCHH EIKRFSNLMKEKINTALAAIRLSDETGFMRHERGWVAQ HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA