Definition | Tropheryma whipplei TW08/27, complete genome. |
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Accession | NC_004551 |
Length | 925,938 |
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The map label for this gene is ftsZ [H]
Identifier: 28572406
GI number: 28572406
Start: 275690
End: 276775
Strand: Direct
Name: ftsZ [H]
Synonym: TW247
Alternate gene names: 28572406
Gene position: 275690-276775 (Clockwise)
Preceding gene: 28572404
Following gene: 28572407
Centisome position: 29.77
GC content: 51.47
Gene sequence:
>1086_bases ATGCGCGATGTTGTCGGTAGCCAGAATTATCTCGCGGTCATAAAGGTTGTTGGAATAGGTGGCGGTGGTGTTAATGCCGT GAATCGCATGATTGAGCTTGGCCTGCGAGGGGTTGAGTTTGTTGCGGTAAATACCGACGCTCAGGCTCTCCTTATGAGTG ATGCCGATGTCAAGCTGGATGTTGGCCGCGCAAGCACACGTGGCCTCGGTGCCGGTGCCGATCCCGAAGTTGGTCGCAGA TCAGCCGAAGAGCATGCCGGTGAAATAGAGGAAACACTTACCGGCGCGGATATGGTATTTATAACCGCCGGTGAGGGCGG TGGGACCGGCACGGGAGGTGCACCAGTTGTCGCAAAGATTGCGAAATCTGTTGGTGCGCTCACGATTGGGGTTGTGACGA AACCTTTTGGCTTTGAGGGTAAAAGGCGCGCCTTGCAGGCAGAGCAGGGGATTGCAGCCCTGAAAAATGAGGTCGATACC TTAATTGTTGTTCCGAATGATAGATTGCTTGAAATAAGTGACCGCAATATAAGCATGCTGGATGCGTTTGCAACAGCCGA TCAAGTGCTGTTGTCAGGTGTTCAGGGTATAACTGATCTCATAACGACACCCGGGCTTATTAATCTTGACTTTGCCGATG TTAGGTCAGTTATGCAGGGTGCAGGATCTGCTCTAATGGGGATAGGTTCCGCACGAGGCGCCGATAGAGCGATTAAGGCT GCGGAACTCGCCGTCGCATCTCCACTACTTGAGGCTTCGATTGATGGTGCACACGGGGTGTTGCTGAGCATCCAAGGTGG ATCTGATCTTGGCATTTTTGAAATAAATGATGCGGCAAAGCTGGTGCAAGAAGTGGTTCATCCTGAGGCAAATATAATTT TTGGAGCTGTTATCAACGATACTCTCGGTGATGAGGTGCGTGTTACGGTGATAGCTGCGGGATTTGATGGGGGAGAGCCA ACCCTCAAACCAACTTCTATCGCTCCGCTACAGCAAGATAAGTACCCGGATGCGCTCACCCCCTCTCAGTCTGATGATTA CCCATTTGAAGAAGATGGTCTGGATGTCCCAGATTTTCTCCGCTAG
Upstream 100 bases:
>100_bases GTAATGCTTTAACCCTATATCGAGACACGCGTACGCGCTTTGGCTTGCGTTACGCATAAAGGCTTTAGCGTTGTTCAGGT AAGTTGAGCGATGGAGTTGT
Downstream 100 bases:
>100_bases GCGCGACACGTTCTCGGATTTTTAGCAAGATTGCACACTGAGGCTTGGGTTTAAGGTTAGGATATTCCCTGGCGTAACAA GGCTGCGTCGTAGTAACAGA
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRDVVGSQNYLAVIKVVGIGGGGVNAVNRMIELGLRGVEFVAVNTDAQALLMSDADVKLDVGRASTRGLGAGADPEVGRR SAEEHAGEIEETLTGADMVFITAGEGGGTGTGGAPVVAKIAKSVGALTIGVVTKPFGFEGKRRALQAEQGIAALKNEVDT LIVVPNDRLLEISDRNISMLDAFATADQVLLSGVQGITDLITTPGLINLDFADVRSVMQGAGSALMGIGSARGADRAIKA AELAVASPLLEASIDGAHGVLLSIQGGSDLGIFEINDAAKLVQEVVHPEANIIFGAVINDTLGDEVRVTVIAAGFDGGEP TLKPTSIAPLQQDKYPDALTPSQSDDYPFEEDGLDVPDFLR
Sequences:
>Translated_361_residues MRDVVGSQNYLAVIKVVGIGGGGVNAVNRMIELGLRGVEFVAVNTDAQALLMSDADVKLDVGRASTRGLGAGADPEVGRR SAEEHAGEIEETLTGADMVFITAGEGGGTGTGGAPVVAKIAKSVGALTIGVVTKPFGFEGKRRALQAEQGIAALKNEVDT LIVVPNDRLLEISDRNISMLDAFATADQVLLSGVQGITDLITTPGLINLDFADVRSVMQGAGSALMGIGSARGADRAIKA AELAVASPLLEASIDGAHGVLLSIQGGSDLGIFEINDAAKLVQEVVHPEANIIFGAVINDTLGDEVRVTVIAAGFDGGEP TLKPTSIAPLQQDKYPDALTPSQSDDYPFEEDGLDVPDFLR >Mature_361_residues MRDVVGSQNYLAVIKVVGIGGGGVNAVNRMIELGLRGVEFVAVNTDAQALLMSDADVKLDVGRASTRGLGAGADPEVGRR SAEEHAGEIEETLTGADMVFITAGEGGGTGTGGAPVVAKIAKSVGALTIGVVTKPFGFEGKRRALQAEQGIAALKNEVDT LIVVPNDRLLEISDRNISMLDAFATADQVLLSGVQGITDLITTPGLINLDFADVRSVMQGAGSALMGIGSARGADRAIKA AELAVASPLLEASIDGAHGVLLSIQGGSDLGIFEINDAAKLVQEVVHPEANIIFGAVINDTLGDEVRVTVIAAGFDGGEP TLKPTSIAPLQQDKYPDALTPSQSDDYPFEEDGLDVPDFLR
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=358, Percent_Identity=47.2067039106145, Blast_Score=270, Evalue=2e-73,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 37182; Mature: 37182
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVVGSQNYLAVIKVVGIGGGGVNAVNRMIELGLRGVEFVAVNTDAQALLMSDADVKLD CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEE VGRASTRGLGAGADPEVGRRSAEEHAGEIEETLTGADMVFITAGEGGGTGTGGAPVVAKI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHH AKSVGALTIGVVTKPFGFEGKRRALQAEQGIAALKNEVDTLIVVPNDRLLEISDRNISML HHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEH DAFATADQVLLSGVQGITDLITTPGLINLDFADVRSVMQGAGSALMGIGSARGADRAIKA HHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCEEECCCCCCCHHHHHH AELAVASPLLEASIDGAHGVLLSIQGGSDLGIFEINDAAKLVQEVVHPEANIIFGAVIND HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEEECC TLGDEVRVTVIAAGFDGGEPTLKPTSIAPLQQDKYPDALTPSQSDDYPFEEDGLDVPDFL CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC R C >Mature Secondary Structure MRDVVGSQNYLAVIKVVGIGGGGVNAVNRMIELGLRGVEFVAVNTDAQALLMSDADVKLD CCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCEEEE VGRASTRGLGAGADPEVGRRSAEEHAGEIEETLTGADMVFITAGEGGGTGTGGAPVVAKI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHH AKSVGALTIGVVTKPFGFEGKRRALQAEQGIAALKNEVDTLIVVPNDRLLEISDRNISML HHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCEEEH DAFATADQVLLSGVQGITDLITTPGLINLDFADVRSVMQGAGSALMGIGSARGADRAIKA HHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCEEECCCCCCCHHHHHH AELAVASPLLEASIDGAHGVLLSIQGGSDLGIFEINDAAKLVQEVVHPEANIIFGAVIND HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECHHHHHHHHHHCCCCCEEEEEEECC TLGDEVRVTVIAAGFDGGEPTLKPTSIAPLQQDKYPDALTPSQSDDYPFEEDGLDVPDFL CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7830569 [H]