Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 284987067

Identifier: 284987067

GI number: 284987067

Start: 1053699

End: 1054799

Strand: Direct

Name: 284987067

Synonym: YPO0955

Alternate gene names: NA

Gene position: 1053699-1054799 (Clockwise)

Preceding gene: 218928125

Following gene: 218928127

Centisome position: 22.64

GC content: 54.31

Gene sequence:

>1101_bases
ATGCGTCTGTTGTTACTTATTTTCCTGCTCTGCACTTGGGCAGTTAGCGCCAAAACGATTACCGATATTACCGGCCAACG
CATCGAAATTCCGGATAACCCACAGCGTATCGTATTAGGTGAAAGCCGCATGCTATATACCCTCGCGTTGCTGGAACCGG
GCTACCCCGCCGCTCGCGTGGTGGGCTGGCCGTTGGACCTGAAGAAATACGATCCGCAAAGCTGGGCGCTATATACCGAT
AAGTTTCCGCAGATGACCCACATTCCGGCTCTGGGCAGCACGGGTCTGCGCGATATCAACCCGGAGAAGGTGCTGGAGTT
GGCACCAGATCTGGTTATCCTGCCAGTACTCGCTAAAACCACTCATGAAGAAATCGCGCTAATTTCCCTGCTCAAGCAAG
CGCATATCCCGGTGATCCGCGTCGATTTACGCGTCGATCTGCTCAATCACACCATTCCCAGCCTACGCCTGCTCGGCGAA
GCACTGAACCGCCAAGATCGCGCCGAAGCCTTTATTTCTCTGTATCAGTCCCATATGGATCGCATCCACCAGCGCATCGC
CGCTTATCAGGGGCCGCACCCTAGCGTGTTGCTGCAATTGCATCTGGGGCGCGGTGACGAATGCTGCACCACCACGCTAA
AGGGCAATCTCGGCCAACTGCTGGAGTTTGCCGGTGGTAACAACATCGCTGCCGCACAAGTGAAAGGGGTATTCGGCCAG
CTTAGCGAAGAGTATGTGCTGGCCCGTTCACCAGAGATTTATATTGCTACCGGCATGGCAACGGCTGGCAGCCAAGCCAA
AACGCTGGCGCTCGGCCCACAGGTCAGCACCGCGCAAGCGCAGGAGAGTTTCCGTCGCGTTATCGCCACGCAAAGCAAAT
TGCAGCACCTTCCTGCGATTCAAAATGGTCACGCTTGGGGGTTGTGGCACAACTTCTATTTAAGCCCGCTGCATGTAGTG
GCGGCGGAGTTTTTCGCTAAAACGCTTTATCCACACCTGTTTGCCGACGTTTCACCACAGGATACGCTGCAAACTATTTA
CCAGCAGTTTTTGCCGCTGGATTTCACAGGAACTTTCTGGAGCCATTTGGATAATGAATAA

Upstream 100 bases:

>100_bases
GGCCATCTTACCTTTCAACACATTTTTTTTGAATATCTCAAATTGATGTTACAAACGATTTTGATTATCATTCGCCCTCT
TTTTTTAGCCAGTGATAATT

Downstream 100 bases:

>100_bases
AATAAACATGTTCATGCTATCCACGTTCATGCGATCCATGTTCATGCGATCTACGTTGATACCCTCTACGTTCATACTGT
CCACACTACTGCTGCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Ferrichrome/Ferrioxamine B Periplasmic Transporter; Iron Transporter; Ferrisiderophore Receptor Irp6A; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Copper Amine Oxidase Domain Protein; Copper Amine Oxidase Domain-Containing Protein; Iron(III) ABC Transporter

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARVVGWPLDLKKYDPQSWALYTD
KFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGE
ALNRQDRAEAFISLYQSHMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGVFGQ
LSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAIQNGHAWGLWHNFYLSPLHVV
AAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFWSHLDNE

Sequences:

>Translated_366_residues
MRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARVVGWPLDLKKYDPQSWALYTD
KFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGE
ALNRQDRAEAFISLYQSHMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGVFGQ
LSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAIQNGHAWGLWHNFYLSPLHVV
AAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFWSHLDNE
>Mature_366_residues
MRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARVVGWPLDLKKYDPQSWALYTD
KFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKTTHEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGE
ALNRQDRAEAFISLYQSHMDRIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGVFGQ
LSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAIQNGHAWGLWHNFYLSPLHVV
AAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFWSHLDNE

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40759; Mature: 40759

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARV
CHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCEEEEECCCEEEEEEEECCCCCHHHE
VGWPLDLKKYDPQSWALYTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKT
EECCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEEHHHHHC
THEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGEALNRQDRAEAFISLYQSHMD
CHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGVFGQ
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHH
LSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAI
CCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QNGHAWGLWHNFYLSPLHVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFW
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHH
SHLDNE
HHCCCC
>Mature Secondary Structure
MRLLLLIFLLCTWAVSAKTITDITGQRIEIPDNPQRIVLGESRMLYTLALLEPGYPAARV
CHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCEEEEECCCEEEEEEEECCCCCHHHE
VGWPLDLKKYDPQSWALYTDKFPQMTHIPALGSTGLRDINPEKVLELAPDLVILPVLAKT
EECCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHCCCEEEEHHHHHC
THEEIALISLLKQAHIPVIRVDLRVDLLNHTIPSLRLLGEALNRQDRAEAFISLYQSHMD
CHHHHHHHHHHHHHCCCEEEEEEEHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RIHQRIAAYQGPHPSVLLQLHLGRGDECCTTTLKGNLGQLLEFAGGNNIAAAQVKGVFGQ
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHH
LSEEYVLARSPEIYIATGMATAGSQAKTLALGPQVSTAQAQESFRRVIATQSKLQHLPAI
CCCCEEEECCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QNGHAWGLWHNFYLSPLHVVAAEFFAKTLYPHLFADVSPQDTLQTIYQQFLPLDFTGTFW
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHH
SHLDNE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA