| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is fct [H]
Identifier: 218928127
GI number: 218928127
Start: 1054837
End: 1056936
Strand: Direct
Name: fct [H]
Synonym: YPO0956
Alternate gene names: 218928127
Gene position: 1054837-1056936 (Clockwise)
Preceding gene: 284987067
Following gene: 218928156
Centisome position: 22.67
GC content: 53.43
Gene sequence:
>2100_bases ATGTTCATGCGATCTACGTTGATACCCTCTACGTTCATACTGTCCACACTACTGCTGCCGGCTGTCGTGTTGGCAGAAGA TACGATAATCGTTGAGAGAAATAGATCGCAAACTGATAGCTATCAAGCGACCACCAGCGTGACAGCCAATCGATCGCCAG CCAACATTATCGATACCCCGCAAAACGTGACTGTCGTGACACATCCGGTGTTGGAAGATTATGATGTGACCAATCTTGGC GAGGCGCTTTATTTTGTCAGCGGGATTACCCAATCCAACACGCTGGGTGGCACGCAAGATGCGCTGATTAAGCGCGGTTT CGGCAATAACCGTGACGGCTCAATTCTGCACGATGGCATACGCTCAATTCAGGCACGTAACTTCACGCCCACCAGCGAAC GCGTCGAGGTGCTGAAAGGCCCCTCCTCCATGCTATACGGTATGAATGAACCGGGTGGGCTGATCAATGTGATCAGCAAA AAGCCACAACTCGATCCCCATGTGCATTTGGAAGCCAACGCCAGTAGTTTCAAGGGTGGCGGTGGCCAACTTGATGTAAC CGGCCCCTTGGGGGAATCCGGCTTTGCCGGGAGGCTGATTATCGATCATCAGGAGACCGATTACTGGCGTAACTTTGGCC GTAACCGCCAGACTGTGGTCGCGCCATCGCTTGACTGGTACGGTGAAAACACCACCGTACACCTCGCTTGGGAACGAATG GAGTATTTGGTACCGTTCGACCGTGGCACGGTGATTGACCCACGCACTGGCAAACCCGTCGACACGCCGCGTGATCGCCG TTTCGACGAGAGCTATAACGCCACCCGCGGCGATCAAGACACCGTCACGTTTAGCATCAACCACGATCTGAACGAGTTCT GGTCCACACAGCTAAATTATGCTTTCAGCCGCAATAGCTATAGTGATAATCAGGCACGCGCCACTGCATTTAACGCTGAA ACCGGCGTATTGACCCGCCAGTCGGATGCTACCGCTAACGCCAAGAGCCATTCGCAGGCGGTGCAGTGGGTAGTCAATGG TGATCTCGATTGGGGTTTCACTCATCACCAACTGATGTTTGGTATCGATTATGAAGCCCGCCGCGTTTTCCGTGGCGACA TGATACGCGGCAGCAAAAACAACGGGTTTAATGTCTATGACCCAATTTATGGCACTCTGCCCCCATCCACAGCCGTCAGT GCTGCTGATAGCGATCAGCGGGAAAATATCGATAGCCGCGCGCTGTTCATTCAAGACTCGATGCGCCTAAACGAGCACTG GCTATTACTCGGTGGCCTGCGCTACGACAGCTTCGATGTGATGGCAGGTAAAGGCCGCCCATTCAAAAAGAATACCGACA GTTCCGATAGCCGCTTGGTGCCGCGCGCCGGGGTGGTTTACAACCTGAACGACTGGTCAAGCCTATACGTCAGCTACACC GAGTCCTTTAAACCGAATGTCTCTATCGCCACCGCCATTGATGCGTTACCCCCCGAATACGGTAAATCGTGGGAGGCGGG CTACAAAATTGATATCAACAACCGTGTAACCGGTACGCTCGCGGTCTACGATATCCATAAACGTAACATTATGGTCAGCG AGCTGGTAGACGGCGAAACAGTCACACGTACCGCCGGTAAGGCGCGTTCACGCGGCCTGGAACTGGATATGGCTGGCAAA GTGACCGACTCACTGAGTCTCATTGGCAGCTATGCCTATACCGATGCACGCCTGACTGAAGACCCGGATAACAATGGTAA CGACCTACCCAACGTGGCACGCCACACTGCGGCACTGTTTCTGAGCCGGGACTTCGGCAGTACGTCATTGATTTCAGGCG ATGAAGTGAAAGCAGGTATTGGCGCACGCTATGTCGGGAAACGTGCTGGCGACGCCGCCAACAGTTTCTGGCTAGATAAC TACACCGTAGCGGACGCGTTTATCGCCTGGAAGATGCCGCTCTCCGGCTATCAACTCAAATGGCAGCTTAATGTGAAAAA CCTGTTCGATAAGACGTACTATCCGTCGAGCGCTAACAACCTGCGTATCGCTATCGGCGAACCACGTCAGGTTGTGTTGC AGGGCAGTATCGATTTCTAA
Upstream 100 bases:
>100_bases TACCAGCAGTTTTTGCCGCTGGATTTCACAGGAACTTTCTGGAGCCATTTGGATAATGAATAAAATAAACATGTTCATGC TATCCACGTTCATGCGATCC
Downstream 100 bases:
>100_bases CAAACAGAGGGCATTGTTACTGAAGAGGGTAATGTTACTGCTGCCCTCTGTTTAGATCAACGTCCTGACCTAGCCCCAAA AATCAGGCTTTACTCCGCGA
Product: putative hydroxamate-type ferrisiderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MFMRSTLIPSTFILSTLLLPAVVLAEDTIIVERNRSQTDSYQATTSVTANRSPANIIDTPQNVTVVTHPVLEDYDVTNLG EALYFVSGITQSNTLGGTQDALIKRGFGNNRDGSILHDGIRSIQARNFTPTSERVEVLKGPSSMLYGMNEPGGLINVISK KPQLDPHVHLEANASSFKGGGGQLDVTGPLGESGFAGRLIIDHQETDYWRNFGRNRQTVVAPSLDWYGENTTVHLAWERM EYLVPFDRGTVIDPRTGKPVDTPRDRRFDESYNATRGDQDTVTFSINHDLNEFWSTQLNYAFSRNSYSDNQARATAFNAE TGVLTRQSDATANAKSHSQAVQWVVNGDLDWGFTHHQLMFGIDYEARRVFRGDMIRGSKNNGFNVYDPIYGTLPPSTAVS AADSDQRENIDSRALFIQDSMRLNEHWLLLGGLRYDSFDVMAGKGRPFKKNTDSSDSRLVPRAGVVYNLNDWSSLYVSYT ESFKPNVSIATAIDALPPEYGKSWEAGYKIDINNRVTGTLAVYDIHKRNIMVSELVDGETVTRTAGKARSRGLELDMAGK VTDSLSLIGSYAYTDARLTEDPDNNGNDLPNVARHTAALFLSRDFGSTSLISGDEVKAGIGARYVGKRAGDAANSFWLDN YTVADAFIAWKMPLSGYQLKWQLNVKNLFDKTYYPSSANNLRIAIGEPRQVVLQGSIDF
Sequences:
>Translated_699_residues MFMRSTLIPSTFILSTLLLPAVVLAEDTIIVERNRSQTDSYQATTSVTANRSPANIIDTPQNVTVVTHPVLEDYDVTNLG EALYFVSGITQSNTLGGTQDALIKRGFGNNRDGSILHDGIRSIQARNFTPTSERVEVLKGPSSMLYGMNEPGGLINVISK KPQLDPHVHLEANASSFKGGGGQLDVTGPLGESGFAGRLIIDHQETDYWRNFGRNRQTVVAPSLDWYGENTTVHLAWERM EYLVPFDRGTVIDPRTGKPVDTPRDRRFDESYNATRGDQDTVTFSINHDLNEFWSTQLNYAFSRNSYSDNQARATAFNAE TGVLTRQSDATANAKSHSQAVQWVVNGDLDWGFTHHQLMFGIDYEARRVFRGDMIRGSKNNGFNVYDPIYGTLPPSTAVS AADSDQRENIDSRALFIQDSMRLNEHWLLLGGLRYDSFDVMAGKGRPFKKNTDSSDSRLVPRAGVVYNLNDWSSLYVSYT ESFKPNVSIATAIDALPPEYGKSWEAGYKIDINNRVTGTLAVYDIHKRNIMVSELVDGETVTRTAGKARSRGLELDMAGK VTDSLSLIGSYAYTDARLTEDPDNNGNDLPNVARHTAALFLSRDFGSTSLISGDEVKAGIGARYVGKRAGDAANSFWLDN YTVADAFIAWKMPLSGYQLKWQLNVKNLFDKTYYPSSANNLRIAIGEPRQVVLQGSIDF >Mature_699_residues MFMRSTLIPSTFILSTLLLPAVVLAEDTIIVERNRSQTDSYQATTSVTANRSPANIIDTPQNVTVVTHPVLEDYDVTNLG EALYFVSGITQSNTLGGTQDALIKRGFGNNRDGSILHDGIRSIQARNFTPTSERVEVLKGPSSMLYGMNEPGGLINVISK KPQLDPHVHLEANASSFKGGGGQLDVTGPLGESGFAGRLIIDHQETDYWRNFGRNRQTVVAPSLDWYGENTTVHLAWERM EYLVPFDRGTVIDPRTGKPVDTPRDRRFDESYNATRGDQDTVTFSINHDLNEFWSTQLNYAFSRNSYSDNQARATAFNAE TGVLTRQSDATANAKSHSQAVQWVVNGDLDWGFTHHQLMFGIDYEARRVFRGDMIRGSKNNGFNVYDPIYGTLPPSTAVS AADSDQRENIDSRALFIQDSMRLNEHWLLLGGLRYDSFDVMAGKGRPFKKNTDSSDSRLVPRAGVVYNLNDWSSLYVSYT ESFKPNVSIATAIDALPPEYGKSWEAGYKIDINNRVTGTLAVYDIHKRNIMVSELVDGETVTRTAGKARSRGLELDMAGK VTDSLSLIGSYAYTDARLTEDPDNNGNDLPNVARHTAALFLSRDFGSTSLISGDEVKAGIGARYVGKRAGDAANSFWLDN YTVADAFIAWKMPLSGYQLKWQLNVKNLFDKTYYPSSANNLRIAIGEPRQVVLQGSIDF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=756, Percent_Identity=26.8518518518519, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI1787344, Length=748, Percent_Identity=24.5989304812834, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1787723, Length=731, Percent_Identity=23.8030095759234, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1787024, Length=228, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790743, Length=323, Percent_Identity=24.7678018575851, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77450; Mature: 77450
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMRSTLIPSTFILSTLLLPAVVLAEDTIIVERNRSQTDSYQATTSVTANRSPANIIDTP CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEECCC QNVTVVTHPVLEDYDVTNLGEALYFVSGITQSNTLGGTQDALIKRGFGNNRDGSILHDGI CCEEEEEECCCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH RSIQARNFTPTSERVEVLKGPSSMLYGMNEPGGLINVISKKPQLDPHVHLEANASSFKGG HHHHCCCCCCHHHHHHHHCCCHHHEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCC GGQLDVTGPLGESGFAGRLIIDHQETDYWRNFGRNRQTVVAPSLDWYGENTTVHLAWERM CCEEEECCCCCCCCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECE EYLVPFDRGTVIDPRTGKPVDTPRDRRFDESYNATRGDQDTVTFSINHDLNEFWSTQLNY EEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHEE AFSRNSYSDNQARATAFNAETGVLTRQSDATANAKSHSQAVQWVVNGDLDWGFTHHQLMF EEECCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEE GIDYEARRVFRGDMIRGSKNNGFNVYDPIYGTLPPSTAVSAADSDQRENIDSRALFIQDS ECCHHHHHHHHCCEEECCCCCCCEEECCCCCCCCCCHHCCCCCCHHHCCCCCEEEEEECC MRLNEHWLLLGGLRYDSFDVMAGKGRPFKKNTDSSDSRLVPRAGVVYNLNDWSSLYVSYT CCCCCEEEEEECCEECCEEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCCCEEEEEEE ESFKPNVSIATAIDALPPEYGKSWEAGYKIDINNRVTGTLAVYDIHKRNIMVSELVDGET CCCCCCEEEEEEHHCCCHHHCCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEHHCCCCC VTRTAGKARSRGLELDMAGKVTDSLSLIGSYAYTDARLTEDPDNNGNDLPNVARHTAALF EECCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHEEEE LSRDFGSTSLISGDEVKAGIGARYVGKRAGDAANSFWLDNYTVADAFIAWKMPLSGYQLK EECCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCEEECCEEEEEEEEEEECCCCCEEEE WQLNVKNLFDKTYYPSSANNLRIAIGEPRQVVLQGSIDF EEECHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCC >Mature Secondary Structure MFMRSTLIPSTFILSTLLLPAVVLAEDTIIVERNRSQTDSYQATTSVTANRSPANIIDTP CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEECCC QNVTVVTHPVLEDYDVTNLGEALYFVSGITQSNTLGGTQDALIKRGFGNNRDGSILHDGI CCEEEEEECCCCCCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH RSIQARNFTPTSERVEVLKGPSSMLYGMNEPGGLINVISKKPQLDPHVHLEANASSFKGG HHHHCCCCCCHHHHHHHHCCCHHHEECCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCC GGQLDVTGPLGESGFAGRLIIDHQETDYWRNFGRNRQTVVAPSLDWYGENTTVHLAWERM CCEEEECCCCCCCCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEECE EYLVPFDRGTVIDPRTGKPVDTPRDRRFDESYNATRGDQDTVTFSINHDLNEFWSTQLNY EEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHEE AFSRNSYSDNQARATAFNAETGVLTRQSDATANAKSHSQAVQWVVNGDLDWGFTHHQLMF EEECCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEE GIDYEARRVFRGDMIRGSKNNGFNVYDPIYGTLPPSTAVSAADSDQRENIDSRALFIQDS ECCHHHHHHHHCCEEECCCCCCCEEECCCCCCCCCCHHCCCCCCHHHCCCCCEEEEEECC MRLNEHWLLLGGLRYDSFDVMAGKGRPFKKNTDSSDSRLVPRAGVVYNLNDWSSLYVSYT CCCCCEEEEEECCEECCEEEEECCCCCCCCCCCCCCCEECCCCCEEEECCCCCEEEEEEE ESFKPNVSIATAIDALPPEYGKSWEAGYKIDINNRVTGTLAVYDIHKRNIMVSELVDGET CCCCCCEEEEEEHHCCCHHHCCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEHHCCCCC VTRTAGKARSRGLELDMAGKVTDSLSLIGSYAYTDARLTEDPDNNGNDLPNVARHTAALF EECCCCHHHHCCCEEEECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHEEEE LSRDFGSTSLISGDEVKAGIGARYVGKRAGDAANSFWLDNYTVADAFIAWKMPLSGYQLK EECCCCCCEEECCCCCCCCCCHHHHCCCCCCCCCCEEECCEEEEEEEEEEECCCCCEEEE WQLNVKNLFDKTYYPSSANNLRIAIGEPRQVVLQGSIDF EEECHHHHHHCCCCCCCCCCEEEEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]