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The map label for this gene is 28378557

Identifier: 28378557

GI number: 28378557

Start: 1725556

End: 1726761

Strand: Direct

Name: 28378557

Synonym: lp_1908

Alternate gene names: NA

Gene position: 1725556-1726761 (Clockwise)

Preceding gene: 28378551

Following gene: 28378560

Centisome position: 52.16

GC content: 45.69

Gene sequence:

>1206_bases
ATGCGAAAACGTCTTTTAACGACGTCGCCATTTTTGACTGGCCTAAAATTATTAGCTATTCTGCCGCCGGTAGGTATCGG
ATGGCTGATTTATTTAAGCCGGTGGCAATGGCTGGCGTTACTCAAACATCCACGACAATTCAGTCGGCACGACCCGTTGC
TAGGGTTTATCGTCCTATTAATGGGCATCACGACGCTCAATCTCAATCACCACGATTATCGTAGTGTTATTCTGTCTGTC
CTAATGCTTTTTGTATTGGGCAATCTTTGGTTGTTGTGTCGTGAGTCCACGCAGTCGATTGCTTGGCACGAGCTTCGTAA
ATTTATCATCCAATTTGGCTTGTATATTACAATTAGTGGTTTTGCTTTCCACTGGCTTAACCAAGTATTGACATTACCAA
CGTGGCTGAAGTTCATGCTGGGTGACCTATTATGGGGCTATGCTGCTAATCAGAATCGCTTGTTCGGGTCCGCCTATAAT
CCAAATGATGCCTGCTGTTTATTATTGATTGCCCTCGGCTTACTATTGACACAGTTAAGTCATGGAAGTGTTCACCCCTT
CACGCGCTGGCCGCTCATAAACTGGTTTTTGGTCGGCTTACTTTGTGTGGGCGTTTATCAAACCAAATCGCGCACAGGGC
TCATGATCATGATTGCCATTCTGATCATGACGACTTACCAGCTTTGCCGTCACCATCGCATTTTGGTTACAACAATCTTG
ATTGCTGGCAGTTTAATTGTCTGGCACGTTTTCCCTAGAAGTGCTTCGACCATCACCGCACTTCAAAGTCGCTTGACGAT
TTGGCACAACAGCTTCACCGTTTTCAAACAGGCCCCGTACCTCGGCGTGACGTATTTTGGCTTTGCGCGGCACTATTTGC
AACTGACGGGAACCTACGTCCCACACGCCCACGATATTTTGCTCATGCTACTAGCTTCTTTTGGTATCCTAGGCGGTGCC
GGCTTTATTTACTTAGTCCTCAGCAGTGGCTGGCACTTAACCAAATATTGGCACCAGTATCGTACGCCGAATTTGCGTTA
CTTTATGATGACTTTGCCCATCATTCTAGCCTATGGATTGACAGACTTCGTTTTATCTTCTATGCAAGTATTGATTATTA
TTTTGCTCATTATCGCTTGTTGGCACCACGAACAACAATTGCGGCCAATCATTGGCCCTCGCAAGTATCAGTCTCCACTT
ATCTGA

Upstream 100 bases:

>100_bases
TCTATTAATGCAAGTTTGGATGACAGGCAGACGTGCCATAATATGGCTAATGTCGACTGGCAAGCGACATATTATTTAAT
GAGAGAAAGTTTGATTAACC

Downstream 100 bases:

>100_bases
CACTTTTCATCACCATCAATTTCGAACGGGCAGTAATTCCCCATTTCAAAAATAGTGTGCGCTGCCGGTCATTAAGCCGC
AACACACACTATTTTTAGCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MRKRLLTTSPFLTGLKLLAILPPVGIGWLIYLSRWQWLALLKHPRQFSRHDPLLGFIVLLMGITTLNLNHHDYRSVILSV
LMLFVLGNLWLLCRESTQSIAWHELRKFIIQFGLYITISGFAFHWLNQVLTLPTWLKFMLGDLLWGYAANQNRLFGSAYN
PNDACCLLLIALGLLLTQLSHGSVHPFTRWPLINWFLVGLLCVGVYQTKSRTGLMIMIAILIMTTYQLCRHHRILVTTIL
IAGSLIVWHVFPRSASTITALQSRLTIWHNSFTVFKQAPYLGVTYFGFARHYLQLTGTYVPHAHDILLMLLASFGILGGA
GFIYLVLSSGWHLTKYWHQYRTPNLRYFMMTLPIILAYGLTDFVLSSMQVLIIILLIIACWHHEQQLRPIIGPRKYQSPL
I

Sequences:

>Translated_401_residues
MRKRLLTTSPFLTGLKLLAILPPVGIGWLIYLSRWQWLALLKHPRQFSRHDPLLGFIVLLMGITTLNLNHHDYRSVILSV
LMLFVLGNLWLLCRESTQSIAWHELRKFIIQFGLYITISGFAFHWLNQVLTLPTWLKFMLGDLLWGYAANQNRLFGSAYN
PNDACCLLLIALGLLLTQLSHGSVHPFTRWPLINWFLVGLLCVGVYQTKSRTGLMIMIAILIMTTYQLCRHHRILVTTIL
IAGSLIVWHVFPRSASTITALQSRLTIWHNSFTVFKQAPYLGVTYFGFARHYLQLTGTYVPHAHDILLMLLASFGILGGA
GFIYLVLSSGWHLTKYWHQYRTPNLRYFMMTLPIILAYGLTDFVLSSMQVLIIILLIIACWHHEQQLRPIIGPRKYQSPL
I
>Mature_401_residues
MRKRLLTTSPFLTGLKLLAILPPVGIGWLIYLSRWQWLALLKHPRQFSRHDPLLGFIVLLMGITTLNLNHHDYRSVILSV
LMLFVLGNLWLLCRESTQSIAWHELRKFIIQFGLYITISGFAFHWLNQVLTLPTWLKFMLGDLLWGYAANQNRLFGSAYN
PNDACCLLLIALGLLLTQLSHGSVHPFTRWPLINWFLVGLLCVGVYQTKSRTGLMIMIAILIMTTYQLCRHHRILVTTIL
IAGSLIVWHVFPRSASTITALQSRLTIWHNSFTVFKQAPYLGVTYFGFARHYLQLTGTYVPHAHDILLMLLASFGILGGA
GFIYLVLSSGWHLTKYWHQYRTPNLRYFMMTLPIILAYGLTDFVLSSMQVLIIILLIIACWHHEQQLRPIIGPRKYQSPL
I

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46137; Mature: 46137

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA