Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28378472

Identifier: 28378472

GI number: 28378472

Start: 1630517

End: 1630807

Strand: Direct

Name: 28378472

Synonym: lp_1800

Alternate gene names: NA

Gene position: 1630517-1630807 (Clockwise)

Preceding gene: 28378471

Following gene: 28378473

Centisome position: 49.29

GC content: 52.92

Gene sequence:

>291_bases
TTGAATCACAATTATGTGGAAGTTAAGTATCCAGCCATTTTTCGTGATGAAGGCACCTACTGGGATGTCCGTTTTCCAGA
CGTTCCTGCCGCCCAGACCTTTGGGGCGAGTGTCCAAGTTGCTGCGGACAATGCGGCGAACGCGTTGGCTATTGCGCTCT
TTGAACAATCACTCCCGCCGGCGTCGGATCCGCAGTACTGGCGGTTGGCTTCAACGGAATTTGTTGTTTGGATCACGATG
GCGGATGTCCAGTTTGGTCCGGGCGCTGATACACCGGAACCAATGAACTAA

Upstream 100 bases:

>100_bases
GCTGATTAATTTTAATTGCAATCATGATGTTTGAGCTGGGCTTTTGCGACCGTTTTCGGTATAATAGCCTTAAAATGATT
GTAAGAAGTGAGTGATAAAA

Downstream 100 bases:

>100_bases
TGCGTATAAAAGGTAAACGGGTCGGCACCTAATTGGTGTTTCGGACCCGTTTTCTTATTTCATGAAAGAAGTTGAGAAAC
CTTGCCAAACCAGCCACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITM
ADVQFGPGADTPEPMN

Sequences:

>Translated_96_residues
MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITM
ADVQFGPGADTPEPMN
>Mature_96_residues
MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITM
ADVQFGPGADTPEPMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10609; Mature: 10609

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPP
CCCCEEEEECCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC
ASDPQYWRLASTEFVVWITMADVQFGPGADTPEPMN
CCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPP
CCCCEEEEECCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC
ASDPQYWRLASTEFVVWITMADVQFGPGADTPEPMN
CCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA