Click here to switch to the map view.

The map label for this gene is 28378449

Identifier: 28378449

GI number: 28378449

Start: 1607510

End: 1608304

Strand: Direct

Name: 28378449

Synonym: lp_1774

Alternate gene names: NA

Gene position: 1607510-1608304 (Clockwise)

Preceding gene: 28378447

Following gene: 28378450

Centisome position: 48.59

GC content: 46.92

Gene sequence:

>795_bases
ATGAATCAATTAATGACGGAATTGGGACAAGTGTACTATCAGTACCGACCGGCGGGACCACAACAGCCGACGTTGATGTG
CTTACCGGCGTTTGGCTGGGACGCCACTGATTATAATTTTAAGCATTTAATGGCACGATTGCCAAGTCAGGTGGGATTAC
TTGCCATCGACACGATTGGCGTGGGCCGTAGCATTCATAGTCAAATGGTGCGCACTGTCCCGCATATTTTAGCCAATCTT
GAGGATGTGGTTCACCATGAACACGTGAGCAACTTATTATTGGTGGGCCACAGTTTAGGCGCTAGTTACGCATTCTTATA
TGCCCAGCAGCACTTAGATAATGTTTGTGGCTTAGTTTTGCTTGAACCACCCTATGCCGCGATGGCACCACAACTTCTTG
CAAACGTCCAATCTTTTATTGAAAACTATCCGCAACTAGTACAACAGCGACAAACTTTGACACTTCAGCAACTCTTAGCA
GAAGTTAATCCTTTAAACCTACTGGCAGAACGTGTCGCCAATGCCCGTATTGATTTAGCAGCTTACGCGAACGCGAGTAT
TCTGACTGAAGCGCAATGCTTACCACAATTAGTAACGACGCTTCGAACCGCTGAAAAGCGGGTACTGACGCTGCCAATCC
AAGTTTTAGTCACTGACCAACGCTTGACGGCGTACCAACAATCACCGTGGTGCCAGCTTGGTCACCTAGTTCATGCACCA
GGTCAGCATTATTTACACTGGACGAACGAAAATTTTGTCCGGCAACAACTATTGATTGCTCTGTCCCAGTCATAG

Upstream 100 bases:

>100_bases
ACTAGACTATGCATGACTGATTGTAAAGCTGTGTTTTATCTGTAATAAAAAAGCATTTGGAACTACTTACGATGTCTGTC
ATTGTGGGAGGCAAGTAATC

Downstream 100 bases:

>100_bases
GGGGCAAAGAGCCAGTCCACGGTATTAAATTAATCGCTGCAAAGCTAGTACCAGCAACATCTACCAATGGTCTGACTTTA
ATCCAACTGAATCAGCCACC

Product: hydrolase (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNQLMTELGQVYYQYRPAGPQQPTLMCLPAFGWDATDYNFKHLMARLPSQVGLLAIDTIGVGRSIHSQMVRTVPHILANL
EDVVHHEHVSNLLLVGHSLGASYAFLYAQQHLDNVCGLVLLEPPYAAMAPQLLANVQSFIENYPQLVQQRQTLTLQQLLA
EVNPLNLLAERVANARIDLAAYANASILTEAQCLPQLVTTLRTAEKRVLTLPIQVLVTDQRLTAYQQSPWCQLGHLVHAP
GQHYLHWTNENFVRQQLLIALSQS

Sequences:

>Translated_264_residues
MNQLMTELGQVYYQYRPAGPQQPTLMCLPAFGWDATDYNFKHLMARLPSQVGLLAIDTIGVGRSIHSQMVRTVPHILANL
EDVVHHEHVSNLLLVGHSLGASYAFLYAQQHLDNVCGLVLLEPPYAAMAPQLLANVQSFIENYPQLVQQRQTLTLQQLLA
EVNPLNLLAERVANARIDLAAYANASILTEAQCLPQLVTTLRTAEKRVLTLPIQVLVTDQRLTAYQQSPWCQLGHLVHAP
GQHYLHWTNENFVRQQLLIALSQS
>Mature_264_residues
MNQLMTELGQVYYQYRPAGPQQPTLMCLPAFGWDATDYNFKHLMARLPSQVGLLAIDTIGVGRSIHSQMVRTVPHILANL
EDVVHHEHVSNLLLVGHSLGASYAFLYAQQHLDNVCGLVLLEPPYAAMAPQLLANVQSFIENYPQLVQQRQTLTLQQLLA
EVNPLNLLAERVANARIDLAAYANASILTEAQCLPQLVTTLRTAEKRVLTLPIQVLVTDQRLTAYQQSPWCQLGHLVHAP
GQHYLHWTNENFVRQQLLIALSQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29582; Mature: 29582

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLMTELGQVYYQYRPAGPQQPTLMCLPAFGWDATDYNFKHLMARLPSQVGLLAIDTIG
CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCHHCCEEEEECCC
VGRSIHSQMVRTVPHILANLEDVVHHEHVSNLLLVGHSLGASYAFLYAQQHLDNVCGLVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCEEE
LEPPYAAMAPQLLANVQSFIENYPQLVQQRQTLTLQQLLAEVNPLNLLAERVANARIDLA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEH
AYANASILTEAQCLPQLVTTLRTAEKRVLTLPIQVLVTDQRLTAYQQSPWCQLGHLVHAP
HHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHHHHHHCCCHHHHCCHHCCC
GQHYLHWTNENFVRQQLLIALSQS
CCCEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQLMTELGQVYYQYRPAGPQQPTLMCLPAFGWDATDYNFKHLMARLPSQVGLLAIDTIG
CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCHHCCEEEEECCC
VGRSIHSQMVRTVPHILANLEDVVHHEHVSNLLLVGHSLGASYAFLYAQQHLDNVCGLVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCEEE
LEPPYAAMAPQLLANVQSFIENYPQLVQQRQTLTLQQLLAEVNPLNLLAERVANARIDLA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEH
AYANASILTEAQCLPQLVTTLRTAEKRVLTLPIQVLVTDQRLTAYQQSPWCQLGHLVHAP
HHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHHHHHHCCCHHHHCCHHCCC
GQHYLHWTNENFVRQQLLIALSQS
CCCEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA