Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is yvlD [H]

Identifier: 28377612

GI number: 28377612

Start: 688384

End: 688749

Strand: Direct

Name: yvlD [H]

Synonym: lp_0753

Alternate gene names: 28377612

Gene position: 688384-688749 (Clockwise)

Preceding gene: 28377611

Following gene: 28377613

Centisome position: 20.81

GC content: 40.16

Gene sequence:

>366_bases
GTGGGCTTTTGGAAACGAATTTTAATCAATACAATCTTATTTATTGCGATTGCTGGCTTTTTTCAGAGCAGTTTTCACGT
TGCAAGTGTGTGGATGGCTTTAATTGCCAGTTTTGTGCTTGCAATTTTAAACGCCGCTATTAAGCCGTTTTTGCTGTTAT
TATCGTTACCGATTACGTTATTGACACTCGGGCTATTCAGTATTGTCATCAATGGTTTTATGCTTCAGATGACATCCTAC
GTTGTGGGGAAGGCCAATTTCGGCTTTTCGAGTTTTGGCATGGCGATGGTTGTTTCGATTCTCATGTCAATTGCTAACGT
GATTGTTTCCAACTTTTTCGCGAAAGACGGCGTTGATGGTGAATAA

Upstream 100 bases:

>100_bases
CGGTACTCAAGCTAAACCGCAAGCGCATGGGCGCAAAGAGATTCATAACGTTCATGAAGAGGATGATCCGCGTCACTAAG
ATTAATGGAGTGATTATACA

Downstream 100 bases:

>100_bases
AGCGCTTTAAAGTGCTAAGATTAGAAGATAGAAATAATCCGTTTTCAGTCATAAAAGTGTGGCCGCTTGAAAGGGTAGCG
TAATGGCGCGACTGGACAAC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MGFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITLLTLGLFSIVINGFMLQMTSY
VVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDGE

Sequences:

>Translated_121_residues
MGFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITLLTLGLFSIVINGFMLQMTSY
VVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDGE
>Mature_120_residues
GFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITLLTLGLFSIVINGFMLQMTSYV
VGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDGE

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 13134; Mature: 13003

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGLFSIVINGFMLQMTSYVVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
E
C
>Mature Secondary Structure 
GFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLGLFSIVINGFMLQMTSYVVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]