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The map label for this gene is ybaB [C]

Identifier: 28377567

GI number: 28377567

Start: 644701

End: 645009

Strand: Direct

Name: ybaB [C]

Synonym: lp_0699

Alternate gene names: 28377567

Gene position: 644701-645009 (Clockwise)

Preceding gene: 28377566

Following gene: 28377568

Centisome position: 19.49

GC content: 43.69

Gene sequence:

>309_bases
ATGATGCGTGGAATGGGCAATATGCAAAGTATGATGAAACAAATGAAGAAGATGCAGGCGCAAATGACAGCCGAACAAGC
GGCTTTAAATGAACAAACCTTCACGGGTGCGGCGCCAGACGACATGGTCAAAGTCACTTTTACTGGTGATAAGAAGATGA
AGGATATTACGATTAACCCTGATGCTGTTGATCCTGATGATGTGGATATGTTACAGGACTTAGTCGTTGCTGCGGTGAAC
GACGCGTTGACTAAGGTCGATGAACAGACACAAAGTACGATGGGAAAATATACTAAGGGATTACAGTAA

Upstream 100 bases:

>100_bases
ACAAGCACCGGCCAAAGAACCGGTCGTTGAAGAAGCTAAGAATATGTTCGGTGATTTAGTTGAAGTACAGCCGGACTAAA
GACGAAAGGAACTGATAATT

Downstream 100 bases:

>100_bases
AAACGAGGTAAGTACATGCAGTATCCAGAACCAATTGCTAAGTTGATTGATAGTTATATGAAGTTGCCCGGCATTGGTGG
CAAGACTGCGACGCGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMRGMGNMQSMMKQMKKMQAQMTAEQAALNEQTFTGAAPDDMVKVTFTGDKKMKDITINPDAVDPDDVDMLQDLVVAAVN
DALTKVDEQTQSTMGKYTKGLQ

Sequences:

>Translated_102_residues
MMRGMGNMQSMMKQMKKMQAQMTAEQAALNEQTFTGAAPDDMVKVTFTGDKKMKDITINPDAVDPDDVDMLQDLVVAAVN
DALTKVDEQTQSTMGKYTKGLQ
>Mature_102_residues
MMRGMGNMQSMMKQMKKMQAQMTAEQAALNEQTFTGAAPDDMVKVTFTGDKKMKDITINPDAVDPDDVDMLQDLVVAAVN
DALTKVDEQTQSTMGKYTKGLQ

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=101, Percent_Identity=34.6534653465347, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y699_LACPL (Q88YP9)

Other databases:

- EMBL:   AL935253
- RefSeq:   NP_784459.1
- ProteinModelPortal:   Q88YP9
- SMR:   Q88YP9
- GeneID:   1062507
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_0699
- NMPDR:   fig|220668.1.peg.593
- HOGENOM:   HBG734215
- OMA:   KYTKGLM
- ProtClustDB:   PRK00153
- BioCyc:   LPLA220668:LP_0699-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11240; Mature: 11240

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
12.7 %Met     (Translated Protein)
12.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
12.7 %Met     (Mature Protein)
12.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGMGNMQSMMKQMKKMQAQMTAEQAALNEQTFTGAAPDDMVKVTFTGDKKMKDITINP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCC
DAVDPDDVDMLQDLVVAAVNDALTKVDEQTQSTMGKYTKGLQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMRGMGNMQSMMKQMKKMQAQMTAEQAALNEQTFTGAAPDDMVKVTFTGDKKMKDITINP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCC
DAVDPDDVDMLQDLVVAAVNDALTKVDEQTQSTMGKYTKGLQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566