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The map label for this gene is recR

Identifier: 28377568

GI number: 28377568

Start: 645025

End: 645624

Strand: Direct

Name: recR

Synonym: lp_0700

Alternate gene names: 28377568

Gene position: 645025-645624 (Clockwise)

Preceding gene: 28377567

Following gene: 28377569

Centisome position: 19.5

GC content: 46.17

Gene sequence:

>600_bases
ATGCAGTATCCAGAACCAATTGCTAAGTTGATTGATAGTTATATGAAGTTGCCCGGCATTGGTGGCAAGACTGCGACGCG
GCTGGCGTTTTATACAATTGATATGAACGGTGATGACGTCACCGAGTTCGCTAAGTCGCTGATTGCGGCCAAACGGGACC
TGCATTTTTGTAGTATTTGCGGTAATATCACCGAAGATGATCCGTGTGTGATTTGTAAGGATAAGTCGCGTGATCAAAGC
ACCGTTCTGGTTGTTGAAGAGGCCAAGGATGTCATGGCAATGGAAAAGATTAAGGAATACAACGGGCTGTATCACGTCTT
ACATGGGGTATTGTCACCCATTGATGGCAAAGGTCCGGAAGATATCAACATTGCCAGTTTATTGAAACGGCTACAGCAAA
ATGAAGCCATCAAGGAAGTCATTATTGCCACCAACGCTACGCCTGAAGGTGAAGCAACAGCGATGTACATCTCGCGGTTA
GTTAAGCCGGCGGGAATCAAAGTGACCCGATTGGCGCACGGCTTGTCGGTTGGTAGTGATATTCAATATGCGGATGAAAT
GACCTTATTCAAAGCCGTTGAAGGTCGCCAAGAAATGTAA

Upstream 100 bases:

>100_bases
CGTTGCTGCGGTGAACGACGCGTTGACTAAGGTCGATGAACAGACACAAAGTACGATGGGAAAATATACTAAGGGATTAC
AGTAAAAACGAGGTAAGTAC

Downstream 100 bases:

>100_bases
TTGGAGGTGCCACCATGTTTAAACGTAAACAGAAGATCAAGCATCCCAAGGAAGTTTTTGATGAACAGTTGTTGTCGACC
CTGAATGCCGCTAAGTTGGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQYPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGNITEDDPCVICKDKSRDQS
TVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPEDINIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRL
VKPAGIKVTRLAHGLSVGSDIQYADEMTLFKAVEGRQEM

Sequences:

>Translated_199_residues
MQYPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGNITEDDPCVICKDKSRDQS
TVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPEDINIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRL
VKPAGIKVTRLAHGLSVGSDIQYADEMTLFKAVEGRQEM
>Mature_199_residues
MQYPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSICGNITEDDPCVICKDKSRDQS
TVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPEDINIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRL
VKPAGIKVTRLAHGLSVGSDIQYADEMTLFKAVEGRQEM

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=200, Percent_Identity=37.5, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_LACPL (Q88YP8)

Other databases:

- EMBL:   AL935253
- RefSeq:   NP_784460.1
- ProteinModelPortal:   Q88YP8
- SMR:   Q88YP8
- GeneID:   1062508
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_0700
- NMPDR:   fig|220668.1.peg.594
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   LPLA220668:LP_0700-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21880; Mature: 21880

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSIC
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHC
GNITEDDPCVICKDKSRDQSTVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPE
CCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DINIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
IQYADEMTLFKAVEGRQEM
CHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQYPEPIAKLIDSYMKLPGIGGKTATRLAFYTIDMNGDDVTEFAKSLIAAKRDLHFCSIC
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHC
GNITEDDPCVICKDKSRDQSTVLVVEEAKDVMAMEKIKEYNGLYHVLHGVLSPIDGKGPE
CCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DINIASLLKRLQQNEAIKEVIIATNATPEGEATAMYISRLVKPAGIKVTRLAHGLSVGSD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
IQYADEMTLFKAVEGRQEM
CHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566