Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is rsmc

Identifier: 28377564

GI number:

Start: 641338

End: 641946

Strand: Direct

Name: rsmc

Synonym: lp_0695

Alternate gene names: NA

Gene position: NA

Preceding gene: 28377559

Following gene: 28377565

Centisome position: NA

GC content: NA

Gene sequence:

>609_bases
ATGACCAACTATTATTATACACACAATCCGGATATTGTGCATGATGAAAAGCAATGGAATTTTGAAATTTTTAATCACTC
GTTTAAATTTACGACGGACAACGGTGTCTTCTCCAAGCGTACCGTGGATTACGGCTCACGAACACTACTTGCAGCGTTTG
ATCCAACTGATTTGCCAGCGGGCCCAATGCTAGATTTGGGAACCGGATATGGTCCCATTGGGATGGCGCTCGCGTATCAA
TCACCCGAACGAACGGTTGATATGGTCGATGTGAACGAGTTAGCGCTAAGCTTAGCGCGTAAAAATGTTGCTTTGAACCA
AATTACGAATACCAATATTTTTACGTCTGATGTCTATCAACAAGTGACCGCGACTAATTACGCGGCGATTGTCACCAACC
CACCGGTGCGCGCAGGTAAGGCAGTGGTGGATGCGATGTTAACGGGGGCCGTTTCACGGCTAGTCGTTGGTGGAACACTC
ACCGTCGTTTTACAGAAAAAGCAGGGCGCACCATCTGCGAAGAAATTGATGCAAACGACCTTTGGTAATTGTCAGGTGAT
TAAGAAGGACAAAGGGTATTACATCCTACAAAGTGTAAAGGAGGGATAG

Upstream 100 bases:

>100_bases
GTCAGCTTTTAACCGACTAAAAAGTTTTTTAAATTATTTGTGGTTCACTCGCTGAATCAGTTATCATAGATATAGACCAG
AAATTTAGAGGAAAATAAAT

Downstream 100 bases:

>100_bases
TCGTGACGGAACCAACAGCGGAAGACTGGATGCAAGAAGCATTACATGAAGCGCGGATGGCCTACTTAATTGGCGAAGTG
CCGATTGGGGCCGTGATCGT

Product: 16S RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>202_residues
MTNYYYTHNPDIVHDEKQWNFEIFNHSFKFTTDNGVFSKRTVDYGSRTLLAAFDPTDLPAGPMLDLGTGYGPIGMALAYQ
SPERTVDMVDVNELALSLARKNVALNQITNTNIFTSDVYQQVTATNYAAIVTNPPVRAGKAVVDAMLTGAVSRLVVGGTL
TVVLQKKQGAPSAKKLMQTTFGNCQVIKKDKGYYILQSVKEG

Sequences:
NA

Specific function: NA

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA