Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377539

Identifier: 28377539

GI number: 28377539

Start: 614446

End: 614769

Strand: Direct

Name: 28377539

Synonym: lp_0667

Alternate gene names: NA

Gene position: 614446-614769 (Clockwise)

Preceding gene: 28377538

Following gene: 28377540

Centisome position: 18.57

GC content: 40.74

Gene sequence:

>324_bases
ATGCGCTATCCGGATAAAGTTTATTTGTTAACTAAGCTTCCTGATGATGACCCTAATGGTCTTAATCATCAAGTAAGTTA
TCAAAGCCAAGTAGTGCCAGCTAATATGCAACAGGTCAATTTAACATTTGCCCCAAATGGCACGGTGTACAACGCAACGG
TTATTCGTGTCTATGGACGTTATCAGGCCGATGCGATTGGCCTTGATGGTGAATATGTTGAAGGTGTTAACGATACGGTG
CATGAGATTCAAAAAGTTAGTCAGCATGATAAGCAAACGGCGTTCTACATTATTCACAATGAGGTGATACTACATGGCGA
ATAA

Upstream 100 bases:

>100_bases
AACGTTAACGATCTAGCACCTTACTATCCAGATCTCCAAGCCTGGATAGATGGCCAATCTAATACTACTCGTGGCGCTAC
TGCGATTGGTTGGTGATAAT

Downstream 100 bases:

>100_bases
CTATGACAAGATACCTGCCGTTAAATTCTCAATTGACGTTGACTATTTTAATCAATTATTTGAGACTGCTAGAAGGCTTG
CACACAATGGTATGCCAGAG

Product: prophage Lp1 protein 44

Products: NA

Alternate protein names: Prophage Lp2 Protein

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTV
HEIQKVSQHDKQTAFYIIHNEVILHGE

Sequences:

>Translated_107_residues
MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTV
HEIQKVSQHDKQTAFYIIHNEVILHGE
>Mature_107_residues
MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTV
HEIQKVSQHDKQTAFYIIHNEVILHGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12119; Mature: 12119

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGR
CCCCCEEEEEEECCCCCCCCCCCEECCCCEECCCCCEEEEEEECCCCEEEEEEEEEEECC
YQADAIGLDGEYVEGVNDTVHEIQKVSQHDKQTAFYIIHNEVILHGE
CCCEEECCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECC
>Mature Secondary Structure
MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGR
CCCCCEEEEEEECCCCCCCCCCCEECCCCEECCCCCEEEEEEECCCCEEEEEEEEEEECC
YQADAIGLDGEYVEGVNDTVHEIQKVSQHDKQTAFYIIHNEVILHGE
CCCEEECCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA