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The map label for this gene is 28377484

Identifier: 28377484

GI number: 28377484

Start: 578044

End: 579219

Strand: Direct

Name: 28377484

Synonym: lp_0607

Alternate gene names: NA

Gene position: 578044-579219 (Clockwise)

Preceding gene: 28377483

Following gene: 28377485

Centisome position: 17.47

GC content: 41.75

Gene sequence:

>1176_bases
ATGAAGAAGTTAACGGTGCGACTAGTATTTATTGTCGTCGGGGGTACGTTAGGACTAACTTACCTGCCGTTCTTGTGGAC
GACAATTTTGTCGCAACCAAATGTGTTATTGAATAACGTTTTTACCAACTTTTTGTTGGGGGCGCTGATTCTATGGGTTT
TGTCATTGTTCTTAGCCAATGCCGCTGTACGACTGGTGGATCGAGTCGAAAAGAACTTATCCAAGCAAAATCCAATGACA
CTTTTATTTGGCAGTATCGGATTTATTATTGGGTTATTGATCGCGGTTCTGATTTCGCAATTATTTAATCGTAGTCCATT
ATTCCTATTGAACACGGTCGTCCCAATTATTTTGATGTTGTTTTTTGGTTACATTGGTGCGCGAGTCGGGACTACCCGGA
TCGACGAGTGGCGGAAAGTTTTCAACTTCCGCCGTCGTGAAAAGGAAACAAGTCCGGAGATTACTGATGCTCAGCCAGAT
CAGAACTATCATCATTATAAGATTCTAGATACCAACATCTTGATTGACGGCCGGATTTACGACATTGTCAAGACTGGTTT
CTTAGAAGGAACACTGTTAGTACCGAACTTCGTCTTGTATGAATTACAGTACATTGCGGATTCAGCTGATAGTATTAAAC
GTGTGCGGGGTCGTCGCGGGCTAGATATTTTAAATAAGCTACAAAATGAAAATATTATCCCGGTTGAAATGTACGAGGGC
GATTTTGAGGATATTCCAGAAGTTGATAGTAAACTCATTCAATTGGCTAAAAAAGTCAACGGTGTGATCGTGACGAATGA
CTACAACTTGAATAAGGTGATTGAGTTCCAAAACGTACAAGTCCTCAATATTAATCAGTTGGCTAAGTCGTTGAAACCAC
GGGTTATTCCTGGTGAAGAGATGAATGTCATGGTCGTCAAAAATGGTAGCGAACGCCAACAAGGGGTCGGTTACTTGGAC
GATGGGACGATGGTTGTCGTCGAAGATGGGAAGTTTTACATCAATGAAAAGGTGGATGTCGTTGTAACGAGCGCCTTACA
AACGGATGCTGGTCGAATGATTTTTGCCCGTTTAGCACACGCTAATCGCGGAATCCCGGATCATGCGGATGGAAATAATA
AGCACAACAATAATCATAGTAATAATCGAAATAATAATCGCGATAATCGGCACTAG

Upstream 100 bases:

>100_bases
GGATATCCCAACTGGAATCGAAGTAATTGGAGTTGCCACGCTAAAAGAAGCGCTCCAATTAGCATTACAACAACCAAATT
ATTAAAAAGGGGCTGATGCC

Downstream 100 bases:

>100_bases
GTTAAGCGATTCAACGGTAGCAACTCAGTTGATGGGGGCTACCGTTTTTTTGTTCAATGATGACTAATCCAGGACGTCGT
AAGGGAGGCGGCCGAATCGC

Product: PilT family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKKLTVRLVFIVVGGTLGLTYLPFLWTTILSQPNVLLNNVFTNFLLGALILWVLSLFLANAAVRLVDRVEKNLSKQNPMT
LLFGSIGFIIGLLIAVLISQLFNRSPLFLLNTVVPIILMLFFGYIGARVGTTRIDEWRKVFNFRRREKETSPEITDAQPD
QNYHHYKILDTNILIDGRIYDIVKTGFLEGTLLVPNFVLYELQYIADSADSIKRVRGRRGLDILNKLQNENIIPVEMYEG
DFEDIPEVDSKLIQLAKKVNGVIVTNDYNLNKVIEFQNVQVLNINQLAKSLKPRVIPGEEMNVMVVKNGSERQQGVGYLD
DGTMVVVEDGKFYINEKVDVVVTSALQTDAGRMIFARLAHANRGIPDHADGNNKHNNNHSNNRNNNRDNRH

Sequences:

>Translated_391_residues
MKKLTVRLVFIVVGGTLGLTYLPFLWTTILSQPNVLLNNVFTNFLLGALILWVLSLFLANAAVRLVDRVEKNLSKQNPMT
LLFGSIGFIIGLLIAVLISQLFNRSPLFLLNTVVPIILMLFFGYIGARVGTTRIDEWRKVFNFRRREKETSPEITDAQPD
QNYHHYKILDTNILIDGRIYDIVKTGFLEGTLLVPNFVLYELQYIADSADSIKRVRGRRGLDILNKLQNENIIPVEMYEG
DFEDIPEVDSKLIQLAKKVNGVIVTNDYNLNKVIEFQNVQVLNINQLAKSLKPRVIPGEEMNVMVVKNGSERQQGVGYLD
DGTMVVVEDGKFYINEKVDVVVTSALQTDAGRMIFARLAHANRGIPDHADGNNKHNNNHSNNRNNNRDNRH
>Mature_391_residues
MKKLTVRLVFIVVGGTLGLTYLPFLWTTILSQPNVLLNNVFTNFLLGALILWVLSLFLANAAVRLVDRVEKNLSKQNPMT
LLFGSIGFIIGLLIAVLISQLFNRSPLFLLNTVVPIILMLFFGYIGARVGTTRIDEWRKVFNFRRREKETSPEITDAQPD
QNYHHYKILDTNILIDGRIYDIVKTGFLEGTLLVPNFVLYELQYIADSADSIKRVRGRRGLDILNKLQNENIIPVEMYEG
DFEDIPEVDSKLIQLAKKVNGVIVTNDYNLNKVIEFQNVQVLNINQLAKSLKPRVIPGEEMNVMVVKNGSERQQGVGYLD
DGTMVVVEDGKFYINEKVDVVVTSALQTDAGRMIFARLAHANRGIPDHADGNNKHNNNHSNNRNNNRDNRH

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 44333; Mature: 44333

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTVRLVFIVVGGTLGLTYLPFLWTTILSQPNVLLNNVFTNFLLGALILWVLSLFLAN
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVRLVDRVEKNLSKQNPMTLLFGSIGFIIGLLIAVLISQLFNRSPLFLLNTVVPIILML
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FFGYIGARVGTTRIDEWRKVFNFRRREKETSPEITDAQPDQNYHHYKILDTNILIDGRIY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEEECCHHH
DIVKTGFLEGTLLVPNFVLYELQYIADSADSIKRVRGRRGLDILNKLQNENIIPVEMYEG
HHHHHHCCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCC
DFEDIPEVDSKLIQLAKKVNGVIVTNDYNLNKVIEFQNVQVLNINQLAKSLKPRVIPGEE
CCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCEEEEEHHHHHHHCCCCCCCCCC
MNVMVVKNGSERQQGVGYLDDGTMVVVEDGKFYINEKVDVVVTSALQTDAGRMIFARLAH
CEEEEEECCCCHHHCCCEECCCCEEEEECCEEEECCCEEEEEEHHHHCCCHHHHHHHHHH
ANRGIPDHADGNNKHNNNHSNNRNNNRDNRH
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLTVRLVFIVVGGTLGLTYLPFLWTTILSQPNVLLNNVFTNFLLGALILWVLSLFLAN
CCCEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVRLVDRVEKNLSKQNPMTLLFGSIGFIIGLLIAVLISQLFNRSPLFLLNTVVPIILML
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FFGYIGARVGTTRIDEWRKVFNFRRREKETSPEITDAQPDQNYHHYKILDTNILIDGRIY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEEECCHHH
DIVKTGFLEGTLLVPNFVLYELQYIADSADSIKRVRGRRGLDILNKLQNENIIPVEMYEG
HHHHHHCCCCEEECCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCC
DFEDIPEVDSKLIQLAKKVNGVIVTNDYNLNKVIEFQNVQVLNINQLAKSLKPRVIPGEE
CCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCEEEEEHHHHHHHCCCCCCCCCC
MNVMVVKNGSERQQGVGYLDDGTMVVVEDGKFYINEKVDVVVTSALQTDAGRMIFARLAH
CEEEEEECCCCHHHCCCEECCCCEEEEECCEEEECCCEEEEEEHHHHCCCHHHHHHHHHH
ANRGIPDHADGNNKHNNNHSNNRNNNRDNRH
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8885268; 11679669 [H]