Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28199128
Identifier: 28199128
GI number: 28199128
Start: 1444155
End: 1444556
Strand: Reverse
Name: 28199128
Synonym: PD1241
Alternate gene names: NA
Gene position: 1444556-1444155 (Counterclockwise)
Preceding gene: 28199129
Following gene: 28199127
Centisome position: 57.33
GC content: 41.79
Gene sequence:
>402_bases GTGATAGGTGATGACATGTTAACGCAAGAACAGATAGATGATATTTGTGAGAATTTAGGGGGGGCTTTGGATGGACTTTG GAGTTGTATAAGGAGGATCTATGGAGTTGCTCCTCATCAAGAGGATCCGGCCTCATTTGAAGAAAGAAAAAATGATTTCT TATTTTTAATAGGGAAATTACTGGATGAGGGACGTCTCAAGCTTGCCGAAAAGGGTAAATTTTTCACCGGTACCACTGAA GAATTGGTGGAGATGTTTAGAAGCTCTTTTCCTGCTTCAGATGAAGAGATGGATCTTGAAGGTGCAGGGCTTTGGTTTTT TATGGATGAATGTCCCGCCGGAGCAGTCTGGGTATTTAAAGGAGAAGGAGAAAATGGTGAGGATTATTACGAGTGGACAT GA
Upstream 100 bases:
>100_bases AATCACAAGACTTGACTAAAGCAAGATGGACGATTGATATACAAAATAATCCCTCTTTGATGGAGCTTACAAAAACCGAC AAAGTTGAACTTAAATTTAG
Downstream 100 bases:
>100_bases GGTGTGTTGATGCGTTGCATGATGCGTTATTCATTTTATTCCCTGTTGCAGTGATTTATTTAAATCCACAGATGCCGTGC CCCTCATGGGGCGGTATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIGDDMLTQEQIDDICENLGGALDGLWSCIRRIYGVAPHQEDPASFEERKNDFLFLIGKLLDEGRLKLAEKGKFFTGTTE ELVEMFRSSFPASDEEMDLEGAGLWFFMDECPAGAVWVFKGEGENGEDYYEWT
Sequences:
>Translated_133_residues MIGDDMLTQEQIDDICENLGGALDGLWSCIRRIYGVAPHQEDPASFEERKNDFLFLIGKLLDEGRLKLAEKGKFFTGTTE ELVEMFRSSFPASDEEMDLEGAGLWFFMDECPAGAVWVFKGEGENGEDYYEWT >Mature_133_residues MIGDDMLTQEQIDDICENLGGALDGLWSCIRRIYGVAPHQEDPASFEERKNDFLFLIGKLLDEGRLKLAEKGKFFTGTTE ELVEMFRSSFPASDEEMDLEGAGLWFFMDECPAGAVWVFKGEGENGEDYYEWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15109; Mature: 15109
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGDDMLTQEQIDDICENLGGALDGLWSCIRRIYGVAPHQEDPASFEERKNDFLFLIGKL CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHH LDEGRLKLAEKGKFFTGTTEELVEMFRSSFPASDEEMDLEGAGLWFFMDECPAGAVWVFK HCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE GEGENGEDYYEWT CCCCCCCCCCCCC >Mature Secondary Structure MIGDDMLTQEQIDDICENLGGALDGLWSCIRRIYGVAPHQEDPASFEERKNDFLFLIGKL CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHH LDEGRLKLAEKGKFFTGTTEELVEMFRSSFPASDEEMDLEGAGLWFFMDECPAGAVWVFK HCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE GEGENGEDYYEWT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA