Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28199129

Identifier: 28199129

GI number: 28199129

Start: 1444553

End: 1445692

Strand: Reverse

Name: 28199129

Synonym: PD1242

Alternate gene names: NA

Gene position: 1445692-1444553 (Counterclockwise)

Preceding gene: 28199130

Following gene: 28199128

Centisome position: 57.37

GC content: 52.37

Gene sequence:

>1140_bases
GTGACCGCCCTGACCCTGGCCGCCGGCCAACAAGTGACCGGCCCGGCCACCCAAATGCTGCAAAACGCCGCAGTCAACTA
CATCCAAAGCCTGGGCGCCCGCGAAATCAAAGACCTTGCCGACACCCTGGGCAGCGACACCGCCCGCAGCGCCCTGCAAG
GCCTCCTGGGTTGTGCCGGTGCCGCCGCCCAAGGCCAGGCTTGTGGTGCTGGCGCGGTAGGTGGTGCCGCCGCCGTTGTC
ATCAACAGCCTTCTAGACCGCGCCAACGGTGCTGAAGCGGCCAGCCTCAGCGCTGAAGAAAAACAACACCGTACCGACCT
AGTCACCAGCCTGGTGGCCGGCATCACCACCGCCGCCGGAGGCGATGCCGCCGTCAGCAGCGCCGCCGCCCGCCTGGAAA
CCGAAAACAACGCCGCCTTTATCCCAGTGATTCTTGGCGCCGTCTGGCTAGCCGATAAAGGCATCACCGCCTATCAAGCT
TGGCAAGACATCAAAGCGATTCGTTCCGGAGAAAAAACCCTAGAACAAGTGGCCCTAGAAAGAGGGCAGGACTACGTCAC
CTCCATAGTGATTGGCAACCTTGCCAAATACGGCCTTAAAGCGGCAATGATCGGCGGTCGCTGGATTTCTGGCACCGCAA
AAGAGATTGCCAATGCAGAAAAAGAAGCGCTTAGGCAAATAAAAAATAACCCCAAAGGCCCTGATTTAACCCAAAAACCG
CCTGGTCAAATCATGGCGCTGCAGCGGCAAAAGCGCCTGGATGATGTGAAAAGTGTGATTGGCAGGCGTAGTCAGAAGAA
TGAATTAGTTGTTGATGGTATAAAATTTGAATACGTACCGTATGACCCCTTAGTCAAAGGGGGCAGTAATAAAGCGGGTA
ATGTGAGGGTATTTAAATCAGAAGCTTTAACTGATAAGCAGATTATGAATTATGCACAGCAATTGGCGGGAGATGTGCCT
TTAAAGAAGATAAAGGAAGGTCTTTTTGCAGCTAAATTGAGTGATGGGACCACGGTGAATTTGAGATCTTTTTCTAAATC
ACAAGACTTGACTAAAGCAAGATGGACGATTGATATACAAAATAATCCCTCTTTGATGGAGCTTACAAAAACCGACAAAG
TTGAACTTAAATTTAGGTGA

Upstream 100 bases:

>100_bases
GAACCTGCCGCTTAAAGTCGGCTTTGACATCGTCGCCGCCCTACAACAACGCATCCAAAACAACACCACCTGGGAACTGG
GTGGCACCGGCCACACCATC

Downstream 100 bases:

>100_bases
TAGGTGATGACATGTTAACGCAAGAACAGATAGATGATATTTGTGAGAATTTAGGGGGGGCTTTGGATGGACTTTGGAGT
TGTATAAGGAGGATCTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTALTLAAGQQVTGPATQMLQNAAVNYIQSLGAREIKDLADTLGSDTARSALQGLLGCAGAAAQGQACGAGAVGGAAAVV
INSLLDRANGAEAASLSAEEKQHRTDLVTSLVAGITTAAGGDAAVSSAAARLETENNAAFIPVILGAVWLADKGITAYQA
WQDIKAIRSGEKTLEQVALERGQDYVTSIVIGNLAKYGLKAAMIGGRWISGTAKEIANAEKEALRQIKNNPKGPDLTQKP
PGQIMALQRQKRLDDVKSVIGRRSQKNELVVDGIKFEYVPYDPLVKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVP
LKKIKEGLFAAKLSDGTTVNLRSFSKSQDLTKARWTIDIQNNPSLMELTKTDKVELKFR

Sequences:

>Translated_379_residues
MTALTLAAGQQVTGPATQMLQNAAVNYIQSLGAREIKDLADTLGSDTARSALQGLLGCAGAAAQGQACGAGAVGGAAAVV
INSLLDRANGAEAASLSAEEKQHRTDLVTSLVAGITTAAGGDAAVSSAAARLETENNAAFIPVILGAVWLADKGITAYQA
WQDIKAIRSGEKTLEQVALERGQDYVTSIVIGNLAKYGLKAAMIGGRWISGTAKEIANAEKEALRQIKNNPKGPDLTQKP
PGQIMALQRQKRLDDVKSVIGRRSQKNELVVDGIKFEYVPYDPLVKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVP
LKKIKEGLFAAKLSDGTTVNLRSFSKSQDLTKARWTIDIQNNPSLMELTKTDKVELKFR
>Mature_378_residues
TALTLAAGQQVTGPATQMLQNAAVNYIQSLGAREIKDLADTLGSDTARSALQGLLGCAGAAAQGQACGAGAVGGAAAVVI
NSLLDRANGAEAASLSAEEKQHRTDLVTSLVAGITTAAGGDAAVSSAAARLETENNAAFIPVILGAVWLADKGITAYQAW
QDIKAIRSGEKTLEQVALERGQDYVTSIVIGNLAKYGLKAAMIGGRWISGTAKEIANAEKEALRQIKNNPKGPDLTQKPP
GQIMALQRQKRLDDVKSVIGRRSQKNELVVDGIKFEYVPYDPLVKGGSNKAGNVRVFKSEALTDKQIMNYAQQLAGDVPL
KKIKEGLFAAKLSDGTTVNLRSFSKSQDLTKARWTIDIQNNPSLMELTKTDKVELKFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40090; Mature: 39959

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALTLAAGQQVTGPATQMLQNAAVNYIQSLGAREIKDLADTLGSDTARSALQGLLGCAG
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
AAAQGQACGAGAVGGAAAVVINSLLDRANGAEAASLSAEEKQHRTDLVTSLVAGITTAAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCC
GDAAVSSAAARLETENNAAFIPVILGAVWLADKGITAYQAWQDIKAIRSGEKTLEQVALE
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGQDYVTSIVIGNLAKYGLKAAMIGGRWISGTAKEIANAEKEALRQIKNNPKGPDLTQKP
HCHHHHHHHHHHHHHHHHHHHHEECCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGQIMALQRQKRLDDVKSVIGRRSQKNELVVDGIKFEYVPYDPLVKGGSNKAGNVRVFKS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCCHHHCCCCCCCCCEEEEHH
EALTDKQIMNYAQQLAGDVPLKKIKEGLFAAKLSDGTTVNLRSFSKSQDLTKARWTIDIQ
HHCCHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEECCCCCCCCCCEEEEEEEEC
NNPSLMELTKTDKVELKFR
CCCCEEEEECCCCEEEEEC
>Mature Secondary Structure 
TALTLAAGQQVTGPATQMLQNAAVNYIQSLGAREIKDLADTLGSDTARSALQGLLGCAG
CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
AAAQGQACGAGAVGGAAAVVINSLLDRANGAEAASLSAEEKQHRTDLVTSLVAGITTAAG
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCC
GDAAVSSAAARLETENNAAFIPVILGAVWLADKGITAYQAWQDIKAIRSGEKTLEQVALE
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RGQDYVTSIVIGNLAKYGLKAAMIGGRWISGTAKEIANAEKEALRQIKNNPKGPDLTQKP
HCHHHHHHHHHHHHHHHHHHHHEECCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGQIMALQRQKRLDDVKSVIGRRSQKNELVVDGIKFEYVPYDPLVKGGSNKAGNVRVFKS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECEEEEECCCCHHHCCCCCCCCCEEEEHH
EALTDKQIMNYAQQLAGDVPLKKIKEGLFAAKLSDGTTVNLRSFSKSQDLTKARWTIDIQ
HHCCHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEEECCCCCCCCCCEEEEEEEEC
NNPSLMELTKTDKVELKFR
CCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA