Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28199127
Identifier: 28199127
GI number: 28199127
Start: 1443573
End: 1443932
Strand: Reverse
Name: 28199127
Synonym: PD1240
Alternate gene names: NA
Gene position: 1443932-1443573 (Counterclockwise)
Preceding gene: 28199128
Following gene: 28199126
Centisome position: 57.3
GC content: 43.61
Gene sequence:
>360_bases TTGCTTGATAAAAAGAACCCAAAAAATGAGTTGGTGATTGCAGGGATAGAGGTCAAAGCCACACCGCGTGGTTCCGTAGG GGGAAGTAATAAAAGTGGTACAACCAAGGTATTTGACTCGCGTGCGTTAACCGATGCGCAGATTAAAGACTATGCACAGC AATTAACTGGAGGTGTGCCTTTAAAGCAGACGAGGACACCGGGGGTTTATATGGCTGAACTGAGTGATGGAACCACTGTA CGTTTAAGGTCTGTTTCTTCTTCAGATCAACTAACTAAAGCCAGGTGGACGATTGATATAGAAAAGAACCCGACTTTGAG GGGAGTTACAGATCAAAGAGTTGAACTTAAATTTAGGTGA
Upstream 100 bases:
>100_bases TCATCGTATTTTATTCAAGCGCAGTTGCATTAAATAAACTGTACTTGCTAGTCACTTCATCGCGCTGCAGCGGCAAAAGC GCCTGGATGAAGTATCCGCT
Downstream 100 bases:
>100_bases TAGGTGATTACATGTTAACGCAACAGCAGATAGATCATATTTATGAGATGTTAGGCGGGCCTTTGTGTTTTCTTTGGGGT TATATAGAAGATGCGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVPLKQTRTPGVYMAELSDGTTV RLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR
Sequences:
>Translated_119_residues MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVPLKQTRTPGVYMAELSDGTTV RLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR >Mature_119_residues MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVPLKQTRTPGVYMAELSDGTTV RLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13035; Mature: 13035
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVP CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC LKQTRTPGVYMAELSDGTTVRLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR CCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEECCCCCEECCCCCEEEEEEC >Mature Secondary Structure MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVP CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC LKQTRTPGVYMAELSDGTTVRLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR CCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEECCCCCEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA