Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28199127

Identifier: 28199127

GI number: 28199127

Start: 1443573

End: 1443932

Strand: Reverse

Name: 28199127

Synonym: PD1240

Alternate gene names: NA

Gene position: 1443932-1443573 (Counterclockwise)

Preceding gene: 28199128

Following gene: 28199126

Centisome position: 57.3

GC content: 43.61

Gene sequence:

>360_bases
TTGCTTGATAAAAAGAACCCAAAAAATGAGTTGGTGATTGCAGGGATAGAGGTCAAAGCCACACCGCGTGGTTCCGTAGG
GGGAAGTAATAAAAGTGGTACAACCAAGGTATTTGACTCGCGTGCGTTAACCGATGCGCAGATTAAAGACTATGCACAGC
AATTAACTGGAGGTGTGCCTTTAAAGCAGACGAGGACACCGGGGGTTTATATGGCTGAACTGAGTGATGGAACCACTGTA
CGTTTAAGGTCTGTTTCTTCTTCAGATCAACTAACTAAAGCCAGGTGGACGATTGATATAGAAAAGAACCCGACTTTGAG
GGGAGTTACAGATCAAAGAGTTGAACTTAAATTTAGGTGA

Upstream 100 bases:

>100_bases
TCATCGTATTTTATTCAAGCGCAGTTGCATTAAATAAACTGTACTTGCTAGTCACTTCATCGCGCTGCAGCGGCAAAAGC
GCCTGGATGAAGTATCCGCT

Downstream 100 bases:

>100_bases
TAGGTGATTACATGTTAACGCAACAGCAGATAGATCATATTTATGAGATGTTAGGCGGGCCTTTGTGTTTTCTTTGGGGT
TATATAGAAGATGCGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVPLKQTRTPGVYMAELSDGTTV
RLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR

Sequences:

>Translated_119_residues
MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVPLKQTRTPGVYMAELSDGTTV
RLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR
>Mature_119_residues
MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVPLKQTRTPGVYMAELSDGTTV
RLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR

Specific function: Unknown

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13035; Mature: 13035

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVP
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC
LKQTRTPGVYMAELSDGTTVRLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR
CCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEECCCCCEECCCCCEEEEEEC
>Mature Secondary Structure
MLDKKNPKNELVIAGIEVKATPRGSVGGSNKSGTTKVFDSRALTDAQIKDYAQQLTGGVP
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC
LKQTRTPGVYMAELSDGTTVRLRSVSSSDQLTKARWTIDIEKNPTLRGVTDQRVELKFR
CCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEECCCCCEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA