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The map label for this gene is int

Identifier: 28198969

GI number: 28198969

Start: 1276043

End: 1277236

Strand: Reverse

Name: int

Synonym: PD1075

Alternate gene names: NA

Gene position: 1277236-1276043 (Counterclockwise)

Preceding gene: 28198970

Following gene: 28198962

Centisome position: 50.69

GC content: 53.85

Gene sequence:

>1194_bases
ATGCCTCGGCCACGCAAGTATCACCCGTCGATTCCGCCACACATTGATCAATCCAAAATCCCAAAAGGAATCTATTGGGG
GGATGGACGCTGGTATACGCTGATACCTCACCCAGAGGGCGGGCGGCACCAGAAACGAACCATCGCAGGTCGCGCAGCGC
GCTTATCTGACCTGCACGCCATCATTGAACAGCAACACACGGGCAACGTGAAAGGAACCGTTGGTGACGTGTTTAATCAG
TTTCATCACTCAAGCGAGTTTGCAGGGTTGGCGAAAGCCACCCAGAAAGACTATCAATGGTGCGCACAAGCCATCCAAAG
TTTTCTACTCAAAGACAACACCACATTAGGAAGCAAAGCCGTTAACAGGCTCAATGTGCCCACGTGGCAGCGTTTGGTTG
AAGTCATCGCGCAAGGCCGCCCTGCACAGGGAGACAGTGAAGCGATTCAGCCGGCACCATCCAAGGCAAACCATATGCTG
CGTTATGCACGCCGCGCTTTCGCCTGGGGTATTCGGCACGGTCATTGCACGACCAATCCCGCACATGGAGTCAAACAGGC
CAAGGAACGCGCCAGATATCGTATGCCAGATTTAAAAACCTTTGCTGCAATACATGCATTTGCCGCCGAACGAGGCCAGC
GCCAAGCACATAGCATTGGCTCAGTGGCTCCCTACTTGGCCGCCGCTATGACATTTGCTTACGGCTTACGCCTACGAGGC
ATTGAGGTATGTACCCTCACCGATGCCCACCACAAACCGGAAGGCATCTTATCCAATCGGAGAAAAGGCAGCCGTGACAA
CATCACTCGTTGGAATGACGAATTACGCTCAGCGTGGGATTGGCTTGTTCAGTATCGGGCTGCCCGCTGGGCATCTCACA
AGCGCGCTACACCCCTACGGCCTGAAAATCGGTTCTTGTTCGTCAACCAATCCGGCGCACGGTTAAGCAAGTCATCACTG
GACACTGCATGGCAGCGGATGATTGTCATGGCCATCATGGAAGGTGTCATCACAGAAGAAGAACGCTTCTCGCTGCACGG
GCTCAAGCACCGAGGGATCACCGATAGTGAAGATAAGCGCTCCGGCGGACACCGCACTGAAGTGATGCGCGAGCGTTACG
ACCATGAAATACCTATCGTGGAACCTCCAAAAAAACCAGGGTTTTCCAGATCGCTTCACCGGCGCTATAAATAA

Upstream 100 bases:

>100_bases
GAGAGGGTGGAATCTGGACCACACTCCAAGCACTCAATGCCGCACTGGGGATCGGTACAGACTTAGCCGACGCACCATAT
CGACCAGAAGACATCGTGTA

Downstream 100 bases:

>100_bases
ATGCTTTTGGCATCATATTAAGGTATTGATTTATATGGTGCCGCTTCACAGATTCGAACTGTGGACCTACTGATTACAAA
TCAGTTGCTCTACCAACTGA

Product: phage-related integrase

Products: NA

Alternate protein names: Phage Integrase; Prophage; Integrase; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MPRPRKYHPSIPPHIDQSKIPKGIYWGDGRWYTLIPHPEGGRHQKRTIAGRAARLSDLHAIIEQQHTGNVKGTVGDVFNQ
FHHSSEFAGLAKATQKDYQWCAQAIQSFLLKDNTTLGSKAVNRLNVPTWQRLVEVIAQGRPAQGDSEAIQPAPSKANHML
RYARRAFAWGIRHGHCTTNPAHGVKQAKERARYRMPDLKTFAAIHAFAAERGQRQAHSIGSVAPYLAAAMTFAYGLRLRG
IEVCTLTDAHHKPEGILSNRRKGSRDNITRWNDELRSAWDWLVQYRAARWASHKRATPLRPENRFLFVNQSGARLSKSSL
DTAWQRMIVMAIMEGVITEEERFSLHGLKHRGITDSEDKRSGGHRTEVMRERYDHEIPIVEPPKKPGFSRSLHRRYK

Sequences:

>Translated_397_residues
MPRPRKYHPSIPPHIDQSKIPKGIYWGDGRWYTLIPHPEGGRHQKRTIAGRAARLSDLHAIIEQQHTGNVKGTVGDVFNQ
FHHSSEFAGLAKATQKDYQWCAQAIQSFLLKDNTTLGSKAVNRLNVPTWQRLVEVIAQGRPAQGDSEAIQPAPSKANHML
RYARRAFAWGIRHGHCTTNPAHGVKQAKERARYRMPDLKTFAAIHAFAAERGQRQAHSIGSVAPYLAAAMTFAYGLRLRG
IEVCTLTDAHHKPEGILSNRRKGSRDNITRWNDELRSAWDWLVQYRAARWASHKRATPLRPENRFLFVNQSGARLSKSSL
DTAWQRMIVMAIMEGVITEEERFSLHGLKHRGITDSEDKRSGGHRTEVMRERYDHEIPIVEPPKKPGFSRSLHRRYK
>Mature_396_residues
PRPRKYHPSIPPHIDQSKIPKGIYWGDGRWYTLIPHPEGGRHQKRTIAGRAARLSDLHAIIEQQHTGNVKGTVGDVFNQF
HHSSEFAGLAKATQKDYQWCAQAIQSFLLKDNTTLGSKAVNRLNVPTWQRLVEVIAQGRPAQGDSEAIQPAPSKANHMLR
YARRAFAWGIRHGHCTTNPAHGVKQAKERARYRMPDLKTFAAIHAFAAERGQRQAHSIGSVAPYLAAAMTFAYGLRLRGI
EVCTLTDAHHKPEGILSNRRKGSRDNITRWNDELRSAWDWLVQYRAARWASHKRATPLRPENRFLFVNQSGARLSKSSLD
TAWQRMIVMAIMEGVITEEERFSLHGLKHRGITDSEDKRSGGHRTEVMRERYDHEIPIVEPPKKPGFSRSLHRRYK

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45260; Mature: 45129

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure 
PRPRKYHPSIPPHIDQSKIPKGIYWGDGRWYTLIPHPEGGRHQKRTIAGRAARLSDLHA
CCCCCCCCCCCCCCCHHHCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
IIEQQHTGNVKGTVGDVFNQFHHSSEFAGLAKATQKDYQWCAQAIQSFLLKDNTTLGSKA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VNRLNVPTWQRLVEVIAQGRPAQGDSEAIQPAPSKANHMLRYARRAFAWGIRHGHCTTNP
HHHCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
AHGVKQAKERARYRMPDLKTFAAIHAFAAERGQRQAHSIGSVAPYLAAAMTFAYGLRLRG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IEVCTLTDAHHKPEGILSNRRKGSRDNITRWNDELRSAWDWLVQYRAARWASHKRATPLR
EEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PENRFLFVNQSGARLSKSSLDTAWQRMIVMAIMEGVITEEERFSLHGLKHRGITDSEDKR
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHC
SGGHRTEVMRERYDHEIPIVEPPKKPGFSRSLHRRYK
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA