Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28198970
Identifier: 28198970
GI number: 28198970
Start: 1277236
End: 1277508
Strand: Reverse
Name: 28198970
Synonym: PD1076
Alternate gene names: NA
Gene position: 1277508-1277236 (Counterclockwise)
Preceding gene: 28198971
Following gene: 28198969
Centisome position: 50.7
GC content: 52.75
Gene sequence:
>273_bases ATGAATGCGCCAGTAAAACAAATGCATCACACCCTGTTGTCTATTGAGCACCGCCTGCCGGATATCTACACCTTCCACGA CTTGCAGTTGCTTTGTGGCAGAGGAAAAAAAGTTAAACGTGCGCGCGTCGAAGAATGGGCGCGGCGACAAGGCATCCCCT ACAAGTACGACGGAGAGGGTGGAATCTGGACCACACTCCAAGCACTCAATGCCGCACTGGGGATCGGTACAGACTTAGCC GACGCACCATATCGACCAGAAGACATCGTGTAA
Upstream 100 bases:
>100_bases CGGACAGCCTCCCTTTTCCCGATTCTCAAGCGATAAGAGGTTTGTATCGCGCAAGTAGTCGCCTGGATAGCGTCAAAATA ATTCACAGCCTACCTCCGAG
Downstream 100 bases:
>100_bases TGCCTCGGCCACGCAAGTATCACCCGTCGATTCCGCCACACATTGATCAATCCAAAATCCCAAAAGGAATCTATTGGGGG GATGGACGCTGGTATACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MNAPVKQMHHTLLSIEHRLPDIYTFHDLQLLCGRGKKVKRARVEEWARRQGIPYKYDGEGGIWTTLQALNAALGIGTDLA DAPYRPEDIV
Sequences:
>Translated_90_residues MNAPVKQMHHTLLSIEHRLPDIYTFHDLQLLCGRGKKVKRARVEEWARRQGIPYKYDGEGGIWTTLQALNAALGIGTDLA DAPYRPEDIV >Mature_90_residues MNAPVKQMHHTLLSIEHRLPDIYTFHDLQLLCGRGKKVKRARVEEWARRQGIPYKYDGEGGIWTTLQALNAALGIGTDLA DAPYRPEDIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10226; Mature: 10226
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVKQMHHTLLSIEHRLPDIYTFHDLQLLCGRGKKVKRARVEEWARRQGIPYKYDGEG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCC GIWTTLQALNAALGIGTDLADAPYRPEDIV CHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAPVKQMHHTLLSIEHRLPDIYTFHDLQLLCGRGKKVKRARVEEWARRQGIPYKYDGEG CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCCC GIWTTLQALNAALGIGTDLADAPYRPEDIV CHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA