Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28198962

Identifier: 28198962

GI number: 28198962

Start: 1269577

End: 1270014

Strand: Reverse

Name: 28198962

Synonym: PD1067

Alternate gene names: NA

Gene position: 1270014-1269577 (Counterclockwise)

Preceding gene: 28198969

Following gene: 28198961

Centisome position: 50.4

GC content: 53.88

Gene sequence:

>438_bases
ATGGCGTGCGAGGCTCGATTTAAATACCCATGGGTATGGTTGCTGCTAGCAGCCCTAGTCTTAGTTGACGATGTCATGGC
CATGGATCGTGTGCAGAGACGGTCTTGGGAGGCGACTATAGATGCTTATGTTGTTGCAGTGCGTTGGAGCAACTTTGAGG
ACGTTGAGGAAATGCTTGATTCAGCTTACCGTCTTACCCATTCGCTGACTGATTTGGAGCGTGCACGCTACGCACAGATA
AAGGTCTCTAGCTATCGTGAGTTGCGTAGCAGTCTGCAGGCAGATGGCATGGTGCTACGTGAGGTGGAGATCGGGGTGAT
TGGGCGCAATAGTCAAGCTGAGCGTACCGTCCGCTGTACTGAACGCTGGCGCTGGGACCCAGGGCGTAAACAATGGTGGC
TTGTCTCTGGGTTGCCGGACTTATGGCAGGGGGAGTGA

Upstream 100 bases:

>100_bases
CAAATACCATGGGGTGCGGGCTTGGTCTGGTCTTGTCATGGTGTGCATTATGGATCGGATATTCGTTGAATGGCGTTTGT
CAATACCTAATGGAGTGAAG

Downstream 100 bases:

>100_bases
ACTTACTTTGACTTCCCCTGATTGCCATTGAGTTATGCGACAATCCCCAGTTCACTTCTCCATTAATCCTGTAGATCCGT
GAATTTTGAAGAGCTACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MACEARFKYPWVWLLLAALVLVDDVMAMDRVQRRSWEATIDAYVVAVRWSNFEDVEEMLDSAYRLTHSLTDLERARYAQI
KVSSYRELRSSLQADGMVLREVEIGVIGRNSQAERTVRCTERWRWDPGRKQWWLVSGLPDLWQGE

Sequences:

>Translated_145_residues
MACEARFKYPWVWLLLAALVLVDDVMAMDRVQRRSWEATIDAYVVAVRWSNFEDVEEMLDSAYRLTHSLTDLERARYAQI
KVSSYRELRSSLQADGMVLREVEIGVIGRNSQAERTVRCTERWRWDPGRKQWWLVSGLPDLWQGE
>Mature_144_residues
ACEARFKYPWVWLLLAALVLVDDVMAMDRVQRRSWEATIDAYVVAVRWSNFEDVEEMLDSAYRLTHSLTDLERARYAQIK
VSSYRELRSSLQADGMVLREVEIGVIGRNSQAERTVRCTERWRWDPGRKQWWLVSGLPDLWQGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17112; Mature: 16980

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACEARFKYPWVWLLLAALVLVDDVMAMDRVQRRSWEATIDAYVVAVRWSNFEDVEEMLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHH
SAYRLTHSLTDLERARYAQIKVSSYRELRSSLQADGMVLREVEIGVIGRNSQAERTVRCT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHHHH
ERWRWDPGRKQWWLVSGLPDLWQGE
HHHCCCCCCCCEEEECCCCHHCCCC
>Mature Secondary Structure 
ACEARFKYPWVWLLLAALVLVDDVMAMDRVQRRSWEATIDAYVVAVRWSNFEDVEEMLD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHH
SAYRLTHSLTDLERARYAQIKVSSYRELRSSLQADGMVLREVEIGVIGRNSQAERTVRCT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHHHHHH
ERWRWDPGRKQWWLVSGLPDLWQGE
HHHCCCCCCCCEEEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA