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The map label for this gene is yibN [H]

Identifier: 28198961

GI number: 28198961

Start: 1269058

End: 1269498

Strand: Reverse

Name: yibN [H]

Synonym: PD1066

Alternate gene names: 28198961

Gene position: 1269498-1269058 (Counterclockwise)

Preceding gene: 28198962

Following gene: 28198960

Centisome position: 50.38

GC content: 47.17

Gene sequence:

>441_bases
GTGAATTTTGAAGAGCTACAGGCCTTCGCTGGCCGCAACCCGATCCTTTCGCTGGCTTTCGTTGGTCTGACCATTGCGAT
TGTCGTTACAGAAACTGCACTTCTGTTTCGTCGTTATACCGCGTTGAAGCCGGCTGATCTGACTAGGCTGATCAATAGTG
AGAATGCTTTAGTCGTAGATTTGTCGCCTAGCAGCGATTTCGAAAAAGGACATATTGCTGGTAGTCGCAGTGTGGTTGAG
AGTAAGTTTGATCCTGAAAGTAATAAGCTGCTACTGAGTGCTAAACAATCCCCATTGGTTGTTGTGTGTCGTAATGGACA
TATTTCTGCTGCGGCAGCCAAGCGTCTTAAGAATGCTGGCTTTGAGAAAGTCTATTGGCTTGACGGTGGTATCGCTACTT
GGAAAATGGCTGAAATGCCGCTCATCAAGGGACGTACCTGA

Upstream 100 bases:

>100_bases
GGACTTATGGCAGGGGGAGTGAACTTACTTTGACTTCCCCTGATTGCCATTGAGTTATGCGACAATCCCCAGTTCACTTC
TCCATTAATCCTGTAGATCC

Downstream 100 bases:

>100_bases
ATCCACGGACTTTATTGGCATGGAGTCATCCATCATCAGGTACATCACTCATGTGATACTCACAACGTGTTTGCTAATCC
TCACATCTATTTACCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNFEELQAFAGRNPILSLAFVGLTIAIVVTETALLFRRYTALKPADLTRLINSENALVVDLSPSSDFEKGHIAGSRSVVE
SKFDPESNKLLLSAKQSPLVVVCRNGHISAAAAKRLKNAGFEKVYWLDGGIATWKMAEMPLIKGRT

Sequences:

>Translated_146_residues
MNFEELQAFAGRNPILSLAFVGLTIAIVVTETALLFRRYTALKPADLTRLINSENALVVDLSPSSDFEKGHIAGSRSVVE
SKFDPESNKLLLSAKQSPLVVVCRNGHISAAAAKRLKNAGFEKVYWLDGGIATWKMAEMPLIKGRT
>Mature_146_residues
MNFEELQAFAGRNPILSLAFVGLTIAIVVTETALLFRRYTALKPADLTRLINSENALVVDLSPSSDFEKGHIAGSRSVVE
SKFDPESNKLLLSAKQSPLVVVCRNGHISAAAAKRLKNAGFEKVYWLDGGIATWKMAEMPLIKGRT

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=37.7622377622378, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15932; Mature: 15932

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEELQAFAGRNPILSLAFVGLTIAIVVTETALLFRRYTALKPADLTRLINSENALVVD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEE
LSPSSDFEKGHIAGSRSVVESKFDPESNKLLLSAKQSPLVVVCRNGHISAAAAKRLKNAG
ECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCC
FEKVYWLDGGIATWKMAEMPLIKGRT
CCEEEEECCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MNFEELQAFAGRNPILSLAFVGLTIAIVVTETALLFRRYTALKPADLTRLINSENALVVD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEE
LSPSSDFEKGHIAGSRSVVESKFDPESNKLLLSAKQSPLVVVCRNGHISAAAAKRLKNAG
ECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHCC
FEKVYWLDGGIATWKMAEMPLIKGRT
CCEEEEECCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]