Click here to switch to the map view.

The map label for this gene is yceI [C]

Identifier: 28198925

GI number: 28198925

Start: 1227110

End: 1227823

Strand: Reverse

Name: yceI [C]

Synonym: PD1028

Alternate gene names: 28198925

Gene position: 1227823-1227110 (Counterclockwise)

Preceding gene: 28198931

Following gene: 28198923

Centisome position: 48.73

GC content: 50.28

Gene sequence:

>714_bases
ATGAACACCACTCAAAAACTGTTGTTGCTTGTTGCGTTGACGCTGTACATGACTGCTTGCTCTAACCCTGCCAAGCAGCC
GGAGGTTGCCTCTACTTCGGCAGTAAGTGAAGCGACGCCTTCCCCTCCGGTGACAACGCCTCCAAGTGCAGCTGAACAGG
TCAAGCCTGTTGAGGCCCATTCCGGGAGTTATACACTCGATAGTAGTCACACAGATGTGTTGCTACAGTGGAATCACTTT
GGGTTCTCGAATCCAAGCGCGCACTTTGGTAATGCCGAAGGCACCGTTGTTTACGATGCTGCGGATGTGACTAAATCGAC
GGTGCAAGTCACCCTGCCGCTTTCCGGTCTAAACAGCTTTACCGCTAAACTGGATGAGCACTTGAAGAGTACCGATTTTT
TTGATGCGGCCAAGTTCCCAAGCATCACCTTCAAGAGCACCAAGGTCGTGTCCAACGGCACCAATAAACTGGCTGTGACT
GGTGACCTGACGGTGAAAGGCATAACGAAACCAGTGACTTTGGATGTCACCATCAATGGTGCTGGTGAACATCCGATGAC
AAAAAAGCAAGCGATCGGCTTCGATGCTAACGCCACGATCAAGCGTAGCGAATTTGGTATGAGTGCTTATGTTCCTAATG
TCAGCGACGAAATCAAAGTACGTATCACCGCAGAGGCGCAACTAGAAGGCGCTGTTACTACACCCCATCAATAA

Upstream 100 bases:

>100_bases
CTTGCCGCGCTTGAGTTTCGAGCAAACTGTACACATCTTCTGACTGTTTTTATCTAGCTATGTCTTCAGACACTATCTCA
ATATATAGGGCTCTTATATT

Downstream 100 bases:

>100_bases
AAGGCCGTATCAATAAAGAAGGTATTGCACAGAAGCGATGCTATAGACATACACAGGTCTGTAATGTGTAGGGCCTGTGT
ATGCTCTGAAGCTCACCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNTTQKLLLLVALTLYMTACSNPAKQPEVASTSAVSEATPSPPVTTPPSAAEQVKPVEAHSGSYTLDSSHTDVLLQWNHF
GFSNPSAHFGNAEGTVVYDAADVTKSTVQVTLPLSGLNSFTAKLDEHLKSTDFFDAAKFPSITFKSTKVVSNGTNKLAVT
GDLTVKGITKPVTLDVTINGAGEHPMTKKQAIGFDANATIKRSEFGMSAYVPNVSDEIKVRITAEAQLEGAVTTPHQ

Sequences:

>Translated_237_residues
MNTTQKLLLLVALTLYMTACSNPAKQPEVASTSAVSEATPSPPVTTPPSAAEQVKPVEAHSGSYTLDSSHTDVLLQWNHF
GFSNPSAHFGNAEGTVVYDAADVTKSTVQVTLPLSGLNSFTAKLDEHLKSTDFFDAAKFPSITFKSTKVVSNGTNKLAVT
GDLTVKGITKPVTLDVTINGAGEHPMTKKQAIGFDANATIKRSEFGMSAYVPNVSDEIKVRITAEAQLEGAVTTPHQ
>Mature_237_residues
MNTTQKLLLLVALTLYMTACSNPAKQPEVASTSAVSEATPSPPVTTPPSAAEQVKPVEAHSGSYTLDSSHTDVLLQWNHF
GFSNPSAHFGNAEGTVVYDAADVTKSTVQVTLPLSGLNSFTAKLDEHLKSTDFFDAAKFPSITFKSTKVVSNGTNKLAVT
GDLTVKGITKPVTLDVTINGAGEHPMTKKQAIGFDANATIKRSEFGMSAYVPNVSDEIKVRITAEAQLEGAVTTPHQ

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=170, Percent_Identity=34.7058823529412, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 25079; Mature: 25079

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTQKLLLLVALTLYMTACSNPAKQPEVASTSAVSEATPSPPVTTPPSAAEQVKPVEAH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCEECC
SGSYTLDSSHTDVLLQWNHFGFSNPSAHFGNAEGTVVYDAADVTKSTVQVTLPLSGLNSF
CCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHH
TAKLDEHLKSTDFFDAAKFPSITFKSTKVVSNGTNKLAVTGDLTVKGITKPVTLDVTING
HHHHHHHHHCCCCCCHHCCCCEEEECEEEEECCCCEEEEEECEEEECCCCCEEEEEEECC
AGEHPMTKKQAIGFDANATIKRSEFGMSAYVPNVSDEIKVRITAEAQLEGAVTTPHQ
CCCCCCCHHHHCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNTTQKLLLLVALTLYMTACSNPAKQPEVASTSAVSEATPSPPVTTPPSAAEQVKPVEAH
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCEECC
SGSYTLDSSHTDVLLQWNHFGFSNPSAHFGNAEGTVVYDAADVTKSTVQVTLPLSGLNSF
CCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHH
TAKLDEHLKSTDFFDAAKFPSITFKSTKVVSNGTNKLAVTGDLTVKGITKPVTLDVTING
HHHHHHHHHCCCCCCHHCCCCEEEECEEEEECCCCEEEEEECEEEECCCCCEEEEEEECC
AGEHPMTKKQAIGFDANATIKRSEFGMSAYVPNVSDEIKVRITAEAQLEGAVTTPHQ
CCCCCCCHHHHCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA