Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28198891
Identifier: 28198891
GI number: 28198891
Start: 1197942
End: 1198301
Strand: Reverse
Name: 28198891
Synonym: PD0993
Alternate gene names: NA
Gene position: 1198301-1197942 (Counterclockwise)
Preceding gene: 28198892
Following gene: 28198890
Centisome position: 47.56
GC content: 51.67
Gene sequence:
>360_bases ATGGCAGAGACGGGAAGAAAGTCACATGTGCCAACGGATAAGAGTCGCTTGCTGGCGAAACAATTGACGTCGTTTGGCAT ACCGCATGCGGAGATTGCCTTGTTGATGCAAATCAGTGCGCCGACGCTGCGCAAGCACTACCGCGTGGAGTTAGATACTG GGCATATCCAAGCCAATGCAAAGGTGGCTAAAAGTTTGTTCCGGTTAGCCACGCATAGCACCAATCCGAATATTACAGCC ATCATCTTTTGGCTGAGGACGCGAGCTGGCTGGAAAGACACGCAACGCGTTGAGGTGTCCGGTCGCGATGGGGAGGCGAT TGAACAGAAGGTTGGATTGGCGTTAGTCGATGAAAAATAA
Upstream 100 bases:
>100_bases GCCGAATGAGGCCAGTTTTTTTAGTTTTTTTCGTCTATTAAAAGAAGGGCGATGAAACGAAAAAAACGCGGATGTTTTAT TTCTCCTAAAGAGATCGTTG
Downstream 100 bases:
>100_bases ATCGCCTCGGCCCTCAAGCGGCTTGAGGCTGAGTACTGAACAGGCCATTGATCAAGCGGTGATCAAGGCTAGGTGCGAAG CAGATCATTTATTTTTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAETGRKSHVPTDKSRLLAKQLTSFGIPHAEIALLMQISAPTLRKHYRVELDTGHIQANAKVAKSLFRLATHSTNPNITA IIFWLRTRAGWKDTQRVEVSGRDGEAIEQKVGLALVDEK
Sequences:
>Translated_119_residues MAETGRKSHVPTDKSRLLAKQLTSFGIPHAEIALLMQISAPTLRKHYRVELDTGHIQANAKVAKSLFRLATHSTNPNITA IIFWLRTRAGWKDTQRVEVSGRDGEAIEQKVGLALVDEK >Mature_118_residues AETGRKSHVPTDKSRLLAKQLTSFGIPHAEIALLMQISAPTLRKHYRVELDTGHIQANAKVAKSLFRLATHSTNPNITAI IFWLRTRAGWKDTQRVEVSGRDGEAIEQKVGLALVDEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13254; Mature: 13123
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETGRKSHVPTDKSRLLAKQLTSFGIPHAEIALLMQISAPTLRKHYRVELDTGHIQANA CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCCHHCCEEEEEECCCEEEECH KVAKSLFRLATHSTNPNITAIIFWLRTRAGWKDTQRVEVSGRDGEAIEQKVGLALVDEK HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHCCEEEECCC >Mature Secondary Structure AETGRKSHVPTDKSRLLAKQLTSFGIPHAEIALLMQISAPTLRKHYRVELDTGHIQANA CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCCCHHCCEEEEEECCCEEEECH KVAKSLFRLATHSTNPNITAIIFWLRTRAGWKDTQRVEVSGRDGEAIEQKVGLALVDEK HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA