Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28198892
Identifier: 28198892
GI number: 28198892
Start: 1198607
End: 1199068
Strand: Reverse
Name: 28198892
Synonym: PD0994
Alternate gene names: NA
Gene position: 1199068-1198607 (Counterclockwise)
Preceding gene: 28198893
Following gene: 28198891
Centisome position: 47.59
GC content: 58.01
Gene sequence:
>462_bases ATGATCGTTAATACACTGCGCCGTGTGGGGCGAGGTTTGCCCAGTGTGCGGCTGTTGGTTGAGTACATGATGATTGGTGC GTTGGTGGCGTTGGTGGCGCATGCAGTGCTGGCCTGGTCCGAGCGCAGTCAATTAGCGCAACGTGCGGCGCAGCTGGAAG GCCAGTTAGCGACGGTGGAAAGCACGTTGGATGCGCAGGTTGCGATGAATCGCGATCAAGATGCGGCGATTGCGCGGCTA CGTGCGTTACGGGAGATCGACAGGCAGGCGATTGCGGGGCTGCATACGGATTTGAATCGGATCACGGTGCGCGATCGTGT GTTACGGCAGCGCATTACGCATTTGGAGCAACACAGCGATGAGGCGAAAGCTTTTTTGGATATGGATGTGCCTGACGTGC TTGGGTGCTTGCTCGACGGGGGTTCCTGTCAAGCCAGTTATCGTCACGCAGACCCGCGTTGA
Upstream 100 bases:
>100_bases GCGGCGGTGATTGCCTCCGGTTTAATTGATACACCACAGACCTTAGAGCTGATTCAGAACGTGATTGTGCCCAAGCTCGG CACGGGGAGAAGGAACACAG
Downstream 100 bases:
>100_bases GGTAATCACCCCGCCGCAGGGGTTGTTGCAGCCGTGTGAGGAGCCGCCATTGCCGCGTGTAGAGACCGTCCGCGACTTAC TGAGCCAGACGCTGGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVESTLDAQVAMNRDQDAAIARL RALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSDEAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR
Sequences:
>Translated_153_residues MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVESTLDAQVAMNRDQDAAIARL RALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSDEAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR >Mature_153_residues MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVESTLDAQVAMNRDQDAAIARL RALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSDEAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16988; Mature: 16988
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVE CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH STLDAQVAMNRDQDAAIARLRALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVE CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH STLDAQVAMNRDQDAAIARLRALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSD HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA