Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28198892

Identifier: 28198892

GI number: 28198892

Start: 1198607

End: 1199068

Strand: Reverse

Name: 28198892

Synonym: PD0994

Alternate gene names: NA

Gene position: 1199068-1198607 (Counterclockwise)

Preceding gene: 28198893

Following gene: 28198891

Centisome position: 47.59

GC content: 58.01

Gene sequence:

>462_bases
ATGATCGTTAATACACTGCGCCGTGTGGGGCGAGGTTTGCCCAGTGTGCGGCTGTTGGTTGAGTACATGATGATTGGTGC
GTTGGTGGCGTTGGTGGCGCATGCAGTGCTGGCCTGGTCCGAGCGCAGTCAATTAGCGCAACGTGCGGCGCAGCTGGAAG
GCCAGTTAGCGACGGTGGAAAGCACGTTGGATGCGCAGGTTGCGATGAATCGCGATCAAGATGCGGCGATTGCGCGGCTA
CGTGCGTTACGGGAGATCGACAGGCAGGCGATTGCGGGGCTGCATACGGATTTGAATCGGATCACGGTGCGCGATCGTGT
GTTACGGCAGCGCATTACGCATTTGGAGCAACACAGCGATGAGGCGAAAGCTTTTTTGGATATGGATGTGCCTGACGTGC
TTGGGTGCTTGCTCGACGGGGGTTCCTGTCAAGCCAGTTATCGTCACGCAGACCCGCGTTGA

Upstream 100 bases:

>100_bases
GCGGCGGTGATTGCCTCCGGTTTAATTGATACACCACAGACCTTAGAGCTGATTCAGAACGTGATTGTGCCCAAGCTCGG
CACGGGGAGAAGGAACACAG

Downstream 100 bases:

>100_bases
GGTAATCACCCCGCCGCAGGGGTTGTTGCAGCCGTGTGAGGAGCCGCCATTGCCGCGTGTAGAGACCGTCCGCGACTTAC
TGAGCCAGACGCTGGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVESTLDAQVAMNRDQDAAIARL
RALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSDEAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR

Sequences:

>Translated_153_residues
MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVESTLDAQVAMNRDQDAAIARL
RALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSDEAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR
>Mature_153_residues
MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVESTLDAQVAMNRDQDAAIARL
RALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSDEAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16988; Mature: 16988

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVE
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
STLDAQVAMNRDQDAAIARLRALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVNTLRRVGRGLPSVRLLVEYMMIGALVALVAHAVLAWSERSQLAQRAAQLEGQLATVE
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
STLDAQVAMNRDQDAAIARLRALREIDRQAIAGLHTDLNRITVRDRVLRQRITHLEQHSD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EAKAFLDMDVPDVLGCLLDGGSCQASYRHADPR
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA