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The map label for this gene is 28198890

Identifier: 28198890

GI number: 28198890

Start: 1196402

End: 1197952

Strand: Reverse

Name: 28198890

Synonym: PD0992

Alternate gene names: NA

Gene position: 1197952-1196402 (Counterclockwise)

Preceding gene: 28198891

Following gene: 28198889

Centisome position: 47.54

GC content: 55.77

Gene sequence:

>1551_bases
ATGAAAAATAAATCGCCTCGGCCCTCAAGCGGCTTGAGGCTGAGTACTGAACAGGCCATTGATCAAGCGGTGATCAAGGC
TAGGTGCGAAGCAGATCATTTATTTTTCACGCGGTATTTTTTCAAACAGCGTCAGCAACTGCGGTTTAGGGTGAATTGGC
ACCATCAGGTGATTGCTGGGGTGGTGGATGATGTGATTGCAGGGCGGCGCAAGGATGTGGTGATTAACGTGCCTCCTGGG
TCGTCGAAAACGGAGCTTGTGGCGATTAATTTGATGGCGCGTGGGTTGGCGCTGAATCCGTATGCGCGGTTTTTGCATAT
TAGTTATTCGGATGATTTGGCGCTGCTGAATTCAGAGACGGCGCGGGAGATTGTGCAGTCTGATGAGTATCGTGCGTTGT
GGCCGTTGGAGATTGCCGATGATGCCAAGTCCAAGAAGCGTTGGAATGTGGTGGTGGATGGCAAGAAAGCCGGTGGGGTG
TATGCGGTGAGTCTGGGGGGACAGGTGACGGGGTTTCGTGCCGGACACATGGCCCCGGGATGGCAGGGGGCGATCATTAT
TGATGATCCGCTGAAGGTGGAAGATGCCTACAGCAAGACCGGACGCAGTAAGGCCAACCGTAAGCTGGTGTCCACGGTGA
AGAGTCGTAAAGCCAGTCCGGACACACCAATTATTGTGATCATGCAACGGTTGGCGCAGGACGATCCGACGGGGTTCATC
CAGTCTGGGGGATTCCCGGGGGCGTGGGAGTGTATTGAGATTCCTGCATTGATTGATGATGCCTACGTGTCCGGTTTGCC
GGAGCAGGTGCAAGGGCAGGTGGTGCGTGATGTGCAGGACCAGGACGGACGCTACAGCTACTGGCCGTACAAAGAACCGT
TAGCCGAGTTGCTGGCGTTGGAAGCCACGGATCGTTATGTGTTCAGTGGTCAATATCAGCAGCGGCCCAGTCCGCTGGGC
GGTGGGATCATCAAAGGGGATCAATTTGGGCGCTATACGGTGCTGCCGCGCATTCTCTCGCGCACGGTGTATGGCGATAC
GGCGCAGAAGACGGCTGAGCGCAATGATTACAGCGTCTTCCAACTGTGGGGGTTGGGAGAGGACAAGCGTCTGTATCTGT
TGGACATGATTCGCGGCAAGTGGGAAGCGCCGGAACTCAAGCGGCGGGCGATTGATTTTTGGAATGCGCATCGCGCCTAC
GACCATAAGGTTTCAGCGCCGATCCGTCAGATGAAGATTGAGGACAAATCTAGCGGCACGGGCTTAATTCAGGACATCGC
CAGAGGTGGGGCTGGTCAGGGGCGTATTCCAGTCACGGGCATTGCACGTGTCACCGACAAGCTCACGCGGGTGATGGATG
TGGTGTCCTACATCGATGCGGGATGGGTGGTGATTCCAGAGCAGGCGGGGTGGGTGAAGGATTTTGTGGCTGAGTGTGAA
GCGTTCAGCGCCGATGGCACGCATGCGCACGATGATCAGATTGATCCGATGGTGGATGCGATTAATGATCTGCTGGCCAA
TCCGGCAAGTGATTGGAGTCGCTGGGTGTGA

Upstream 100 bases:

>100_bases
TGGCTGAGGACGCGAGCTGGCTGGAAAGACACGCAACGCGTTGAGGTGTCCGGTCGCGATGGGGAGGCGATTGAACAGAA
GGTTGGATTGGCGTTAGTCG

Downstream 100 bases:

>100_bases
GTGGCCGCAATCGCAACAAGCGCGCCGCGCGGGCCAGATCCGGTGCGGCGCCTCAGCATGTCGTGGACACCTTGCAGAAC
CTGGTGGCCGGATTGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MKNKSPRPSSGLRLSTEQAIDQAVIKARCEADHLFFTRYFFKQRQQLRFRVNWHHQVIAGVVDDVIAGRRKDVVINVPPG
SSKTELVAINLMARGLALNPYARFLHISYSDDLALLNSETAREIVQSDEYRALWPLEIADDAKSKKRWNVVVDGKKAGGV
YAVSLGGQVTGFRAGHMAPGWQGAIIIDDPLKVEDAYSKTGRSKANRKLVSTVKSRKASPDTPIIVIMQRLAQDDPTGFI
QSGGFPGAWECIEIPALIDDAYVSGLPEQVQGQVVRDVQDQDGRYSYWPYKEPLAELLALEATDRYVFSGQYQQRPSPLG
GGIIKGDQFGRYTVLPRILSRTVYGDTAQKTAERNDYSVFQLWGLGEDKRLYLLDMIRGKWEAPELKRRAIDFWNAHRAY
DHKVSAPIRQMKIEDKSSGTGLIQDIARGGAGQGRIPVTGIARVTDKLTRVMDVVSYIDAGWVVIPEQAGWVKDFVAECE
AFSADGTHAHDDQIDPMVDAINDLLANPASDWSRWV

Sequences:

>Translated_516_residues
MKNKSPRPSSGLRLSTEQAIDQAVIKARCEADHLFFTRYFFKQRQQLRFRVNWHHQVIAGVVDDVIAGRRKDVVINVPPG
SSKTELVAINLMARGLALNPYARFLHISYSDDLALLNSETAREIVQSDEYRALWPLEIADDAKSKKRWNVVVDGKKAGGV
YAVSLGGQVTGFRAGHMAPGWQGAIIIDDPLKVEDAYSKTGRSKANRKLVSTVKSRKASPDTPIIVIMQRLAQDDPTGFI
QSGGFPGAWECIEIPALIDDAYVSGLPEQVQGQVVRDVQDQDGRYSYWPYKEPLAELLALEATDRYVFSGQYQQRPSPLG
GGIIKGDQFGRYTVLPRILSRTVYGDTAQKTAERNDYSVFQLWGLGEDKRLYLLDMIRGKWEAPELKRRAIDFWNAHRAY
DHKVSAPIRQMKIEDKSSGTGLIQDIARGGAGQGRIPVTGIARVTDKLTRVMDVVSYIDAGWVVIPEQAGWVKDFVAECE
AFSADGTHAHDDQIDPMVDAINDLLANPASDWSRWV
>Mature_516_residues
MKNKSPRPSSGLRLSTEQAIDQAVIKARCEADHLFFTRYFFKQRQQLRFRVNWHHQVIAGVVDDVIAGRRKDVVINVPPG
SSKTELVAINLMARGLALNPYARFLHISYSDDLALLNSETAREIVQSDEYRALWPLEIADDAKSKKRWNVVVDGKKAGGV
YAVSLGGQVTGFRAGHMAPGWQGAIIIDDPLKVEDAYSKTGRSKANRKLVSTVKSRKASPDTPIIVIMQRLAQDDPTGFI
QSGGFPGAWECIEIPALIDDAYVSGLPEQVQGQVVRDVQDQDGRYSYWPYKEPLAELLALEATDRYVFSGQYQQRPSPLG
GGIIKGDQFGRYTVLPRILSRTVYGDTAQKTAERNDYSVFQLWGLGEDKRLYLLDMIRGKWEAPELKRRAIDFWNAHRAY
DHKVSAPIRQMKIEDKSSGTGLIQDIARGGAGQGRIPVTGIARVTDKLTRVMDVVSYIDAGWVVIPEQAGWVKDFVAECE
AFSADGTHAHDDQIDPMVDAINDLLANPASDWSRWV

Specific function: Unknown

COG id: COG5410

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004921 [H]

Pfam domain/function: PF03237 Terminase_6 [H]

EC number: NA

Molecular weight: Translated: 57573; Mature: 57573

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKSPRPSSGLRLSTEQAIDQAVIKARCEADHLFFTRYFFKQRQQLRFRVNWHHQVIAG
CCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCHHHHHHH
VVDDVIAGRRKDVVINVPPGSSKTELVAINLMARGLALNPYARFLHISYSDDLALLNSET
HHHHHHCCCCCCEEEECCCCCCCCEEEEEEEHHCCCEECCCCEEEEEECCCCEEECCCHH
AREIVQSDEYRALWPLEIADDAKSKKRWNVVVDGKKAGGVYAVSLGGQVTGFRAGHMAPG
HHHHHCCCCCCEEECEEECCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECCCCCCC
WQGAIIIDDPLKVEDAYSKTGRSKANRKLVSTVKSRKASPDTPIIVIMQRLAQDDPTGFI
CCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCE
QSGGFPGAWECIEIPALIDDAYVSGLPEQVQGQVVRDVQDQDGRYSYWPYKEPLAELLAL
ECCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
EATDRYVFSGQYQQRPSPLGGGIIKGDQFGRYTVLPRILSRTVYGDTAQKTAERNDYSVF
HCCCCEEECCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
QLWGLGEDKRLYLLDMIRGKWEAPELKRRAIDFWNAHRAYDHKVSAPIRQMKIEDKSSGT
EEECCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHEECCCCCCC
GLIQDIARGGAGQGRIPVTGIARVTDKLTRVMDVVSYIDAGWVVIPEQAGWVKDFVAECE
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
AFSADGTHAHDDQIDPMVDAINDLLANPASDWSRWV
HCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MKNKSPRPSSGLRLSTEQAIDQAVIKARCEADHLFFTRYFFKQRQQLRFRVNWHHQVIAG
CCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCHHHHHHH
VVDDVIAGRRKDVVINVPPGSSKTELVAINLMARGLALNPYARFLHISYSDDLALLNSET
HHHHHHCCCCCCEEEECCCCCCCCEEEEEEEHHCCCEECCCCEEEEEECCCCEEECCCHH
AREIVQSDEYRALWPLEIADDAKSKKRWNVVVDGKKAGGVYAVSLGGQVTGFRAGHMAPG
HHHHHCCCCCCEEECEEECCCCCCCCCCEEEEECCCCCCEEEEEECCEEEEEECCCCCCC
WQGAIIIDDPLKVEDAYSKTGRSKANRKLVSTVKSRKASPDTPIIVIMQRLAQDDPTGFI
CCCEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCE
QSGGFPGAWECIEIPALIDDAYVSGLPEQVQGQVVRDVQDQDGRYSYWPYKEPLAELLAL
ECCCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
EATDRYVFSGQYQQRPSPLGGGIIKGDQFGRYTVLPRILSRTVYGDTAQKTAERNDYSVF
HCCCCEEECCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
QLWGLGEDKRLYLLDMIRGKWEAPELKRRAIDFWNAHRAYDHKVSAPIRQMKIEDKSSGT
EEECCCCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHEECCCCCCC
GLIQDIARGGAGQGRIPVTGIARVTDKLTRVMDVVSYIDAGWVVIPEQAGWVKDFVAECE
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
AFSADGTHAHDDQIDPMVDAINDLLANPASDWSRWV
HCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]