| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rhlB [H]
Identifier: 255961279
GI number: 255961279
Start: 1130745
End: 1132223
Strand: Reverse
Name: rhlB [H]
Synonym: Pfl01_0971
Alternate gene names: 255961279
Gene position: 1132223-1130745 (Counterclockwise)
Preceding gene: 77457199
Following gene: 77457197
Centisome position: 17.59
GC content: 63.15
Gene sequence:
>1479_bases ATGACCGTGCTCAAAGCACTCAAGAAAATGTTCGGTAAAAGCGAGGCTGAGCAGCTCGCGCCAGTCCCCACTGCGCCGTC GCACGCCGCCGGTCATCGCAACGATGCCAGCAAGGCCGACCGCCAGACGCCCGCCACGCCCCCAAAGCAAGAACCGAAAC CCGCTCCAGCTGCCGCGCCCGCCACCGAGCCGGCCCGCAGCGAAACACCGAAACCGGCCAGACCACGTCGCGAACCCAAG CCCAAGGCGCCGGTGATTCCCTGGAAACTCGAAGACTTCGTCGTCGAGCCCCAGGAAGGCAAGACCCGCTTCCACGATTT CAAACTCGCCCCGGAACTGATGCACGCCATCCACGACCTGGGTTTCCCGTATTGCACACCGATCCAGGCCCAGGTGCTGG GTTATACCCTCGCCGGCAAAGACGCCATCGGCCGCGCACAGACCGGCACCGGCAAGACCGCCGCGTTCCTGATCTCGATC ATCACCCAGCTGCTGCAGACCCCGCCGCCGAAAGAGCGCTACATGGGCGAACCACGGGCGCTGATCATCGCGCCGACCCG CGAGCTGGTGGTGCAGATCGCCAAGGACGCCGCCGACCTGACCAAGTACACCGGTCTCAATGTCATGACCTTCGTCGGCG GGATGGACTTCGACAAGCAGCTCAAGCACCTCGAAGCGCGCCATTGCGACATCCTCGTCGCGACCCCGGGCCGCCTGCTT GACTTCAACCAGCGCGGTGACGTGCACCTGGACATGGTCGAAGTGATGGTGCTGGACGAAGCCGACCGCATGCTCGACAT GGGCTTCATCCCGCAGGTCCGGCAGATCATTCGCCAGACCCCGCCGAAAAGCGAACGCCAGACTCTGCTGTTCTCCGCGA CCTTCACCGATGACGTGATGAACCTCGCCAAGCAGTGGACCACCGATCCTGCGATCGTCGAAATCGAAGTCACCAACGTG GCCAACGAAAACGTCGAGCAGCACATCTACGCGGTGGCCGGTGCCGACAAATACAAACTGCTGTTCAACCTGGTCAACGA CAACGGCTGGGAGCGGGTCATCGTGTTCGCCAACCGCAAGGACGAAGTGCGCCGCATCGAGGAACGCCTGGTGCGTGACG GCATCAACGCCGCGCAACTGTCCGGCGACGTGCCGCAGCACAAGCGGATCAAGACGCTGGAAGGCTTCCGCGAAGGCAAG ATCCGGGTGCTGGTCGCCACCGACGTGGCCGGTCGCGGTATCCACATCGACGGCATCAGCCACGTGATCAACTTCACTCT GCCGGAAGTCCCGGACGACTACGTGCACCGCATCGGCCGTACCGGTCGCGCTGGCGCCGACGGTGTGTCGATCAGCTTCG CCGGTGAGGACGACTCCTATCAGTTGCCGTCCATCGAAGAAAAACTCGGTCGCAAGATCAGCTGTGAAACACCGCCGACC CATCTATTGCGGGCGGTTGAGCGCAAGCGTCCACAGTAA
Upstream 100 bases:
>100_bases CTGACAATTGCGACAGGGGTCGCCCTTTGATCATCCCACTACGCCGCGCCCGTTTCTTGCATTACACTGGCCGGCGTACA TTCCTTAACCAATTGATGAG
Downstream 100 bases:
>100_bases GCGCCGCCAAAACTAGAAGCGCAGCCGGCAACGGACTGCGCTTTTTTTTCGCCCGGATATTGTTCAATAATACTAAAAGT CCATAATAGACAAATTAGTT
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTVLKALKKMFGKSEAEQLAPVPTAPSHAAGHRNDASKADRQTPATPPKQEPKPAPAAAPATEPARSETPKPARPRREPK PKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIHDLGFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISI ITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTDPAIVEIEVTNV ANENVEQHIYAVAGADKYKLLFNLVNDNGWERVIVFANRKDEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGK IRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPT HLLRAVERKRPQ
Sequences:
>Translated_492_residues MTVLKALKKMFGKSEAEQLAPVPTAPSHAAGHRNDASKADRQTPATPPKQEPKPAPAAAPATEPARSETPKPARPRREPK PKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIHDLGFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISI ITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTDPAIVEIEVTNV ANENVEQHIYAVAGADKYKLLFNLVNDNGWERVIVFANRKDEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGK IRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPT HLLRAVERKRPQ >Mature_491_residues TVLKALKKMFGKSEAEQLAPVPTAPSHAAGHRNDASKADRQTPATPPKQEPKPAPAAAPATEPARSETPKPARPRREPKP KAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIHDLGFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISII TQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLD FNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTDPAIVEIEVTNVA NENVEQHIYAVAGADKYKLLFNLVNDNGWERVIVFANRKDEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKI RVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPTH LLRAVERKRPQ
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI222352149, Length=418, Percent_Identity=36.8421052631579, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=38.8732394366197, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI169881239, Length=367, Percent_Identity=38.1471389645777, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI13514809, Length=367, Percent_Identity=38.1471389645777, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=38.8732394366197, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=38.8732394366197, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=38.8732394366197, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=37.7049180327869, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI41327771, Length=412, Percent_Identity=35.6796116504854, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=39.3258426966292, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI38201710, Length=356, Percent_Identity=39.3258426966292, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI55749865, Length=389, Percent_Identity=34.7043701799486, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI50659095, Length=388, Percent_Identity=36.5979381443299, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI21071032, Length=364, Percent_Identity=37.3626373626374, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI45446747, Length=361, Percent_Identity=38.781163434903, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI45446743, Length=361, Percent_Identity=38.781163434903, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=37.5706214689266, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=33.3333333333333, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI13129006, Length=395, Percent_Identity=37.7215189873418, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=35.4748603351955, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI20149629, Length=382, Percent_Identity=34.8167539267016, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI188035877, Length=360, Percent_Identity=36.1111111111111, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=32.8840970350404, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI4758112, Length=375, Percent_Identity=29.8666666666667, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI18375623, Length=375, Percent_Identity=29.8666666666667, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI21040371, Length=370, Percent_Identity=30.5405405405405, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=31.8302387267904, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=31.8302387267904, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI38569505, Length=368, Percent_Identity=35.3260869565217, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI38569503, Length=381, Percent_Identity=34.6456692913386, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=34.6368715083799, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=32.9815303430079, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI83700235, Length=365, Percent_Identity=34.7945205479452, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI6005743, Length=383, Percent_Identity=32.6370757180157, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI8922886, Length=383, Percent_Identity=32.6370757180157, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=33.6986301369863, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=33.7016574585635, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI41327776, Length=382, Percent_Identity=32.1989528795811, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=31.6489361702128, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI62241022, Length=367, Percent_Identity=32.9700272479564, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI62241024, Length=345, Percent_Identity=33.0434782608696, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI38327634, Length=344, Percent_Identity=33.1395348837209, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=27.8606965174129, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI256223453, Length=425, Percent_Identity=27.5294117647059, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI17505907, Length=402, Percent_Identity=28.3582089552239, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=29.4736842105263, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9966805, Length=334, Percent_Identity=31.1377245508982, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI154759257, Length=410, Percent_Identity=28.2926829268293, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=30.03003003003, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=34.2592592592593, Blast_Score=112, Evalue=8e-25, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=45.5525606469003, Blast_Score=323, Evalue=2e-89, Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=42.7027027027027, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI87082221, Length=387, Percent_Identity=38.5012919896641, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1787605, Length=375, Percent_Identity=39.2, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1788930, Length=362, Percent_Identity=40.0552486187845, Blast_Score=226, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=39.2265193370166, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=39.2265193370166, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=39.2265193370166, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI32565321, Length=405, Percent_Identity=34.320987654321, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=36.8852459016393, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI86570094, Length=390, Percent_Identity=35.8974358974359, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=37.883008356546, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=33.8666666666667, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17510559, Length=410, Percent_Identity=34.1463414634146, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=36.5591397849462, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI115533224, Length=356, Percent_Identity=38.4831460674157, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17509811, Length=387, Percent_Identity=34.625322997416, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI71982858, Length=378, Percent_Identity=32.2751322751323, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=33.0645161290323, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=33.0645161290323, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=32.258064516129, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507945, Length=337, Percent_Identity=38.5756676557863, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17537549, Length=416, Percent_Identity=33.1730769230769, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=35.3246753246753, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=33.9673913043478, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507881, Length=377, Percent_Identity=33.42175066313, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=34.2175066312997, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=33.9673913043478, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=34.4, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI115532548, Length=396, Percent_Identity=32.3232323232323, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI115532546, Length=382, Percent_Identity=32.9842931937173, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=32.9177057356608, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI25148203, Length=458, Percent_Identity=27.9475982532751, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI32564046, Length=382, Percent_Identity=32.9842931937173, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17505370, Length=358, Percent_Identity=35.195530726257, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=31.8302387267904, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=28.5714285714286, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17536099, Length=464, Percent_Identity=28.0172413793103, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17536101, Length=464, Percent_Identity=28.0172413793103, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17536103, Length=464, Percent_Identity=28.0172413793103, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=26.8571428571429, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17553716, Length=377, Percent_Identity=27.5862068965517, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17556951, Length=364, Percent_Identity=29.1208791208791, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=35.8851674641148, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25148205, Length=346, Percent_Identity=27.4566473988439, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.4924471299094, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71997889, Length=366, Percent_Identity=26.2295081967213, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17557982, Length=376, Percent_Identity=26.5957446808511, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17566630, Length=319, Percent_Identity=26.9592476489028, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71987152, Length=101, Percent_Identity=43.5643564356436, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324778, Length=367, Percent_Identity=38.4196185286104, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=37.874659400545, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=346, Percent_Identity=40.7514450867052, Blast_Score=236, Evalue=9e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=32.7127659574468, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=38.1868131868132, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6321856, Length=382, Percent_Identity=36.6492146596859, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=35, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6320449, Length=400, Percent_Identity=35, Blast_Score=209, Evalue=7e-55, Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=34.1397849462366, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=35.7541899441341, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=478, Percent_Identity=29.7071129707113, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=372, Percent_Identity=31.7204301075269, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=372, Percent_Identity=31.7204301075269, Blast_Score=183, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6320119, Length=381, Percent_Identity=31.758530183727, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=33.4261838440111, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=383, Percent_Identity=31.331592689295, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=390, Percent_Identity=32.5641025641026, Blast_Score=176, Evalue=9e-45, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=28.3292978208232, Blast_Score=159, Evalue=9e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=30.9462915601023, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6320173, Length=445, Percent_Identity=28.7640449438202, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=28.5714285714286, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=30.2452316076294, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=368, Percent_Identity=30.4347826086957, Blast_Score=139, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=409, Percent_Identity=28.6063569682152, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=382, Percent_Identity=26.7015706806283, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6324366, Length=345, Percent_Identity=25.5072463768116, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI21356161, Length=369, Percent_Identity=37.940379403794, Blast_Score=235, Evalue=6e-62, Organism=Drosophila melanogaster, GI17985987, Length=374, Percent_Identity=37.9679144385027, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24584399, Length=341, Percent_Identity=37.8299120234604, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=38.8429752066116, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=36.604774535809, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24584994, Length=405, Percent_Identity=35.8024691358025, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI21355075, Length=438, Percent_Identity=35.3881278538813, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI281361218, Length=385, Percent_Identity=36.6233766233766, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644481, Length=385, Percent_Identity=36.6233766233766, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644487, Length=385, Percent_Identity=36.6233766233766, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI45551833, Length=385, Percent_Identity=36.6233766233766, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644485, Length=385, Percent_Identity=36.6233766233766, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24644483, Length=385, Percent_Identity=36.6233766233766, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI18857967, Length=396, Percent_Identity=36.8686868686869, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24642151, Length=347, Percent_Identity=37.463976945245, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24662330, Length=360, Percent_Identity=37.5, Blast_Score=215, Evalue=7e-56, Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=33.6021505376344, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24585582, Length=384, Percent_Identity=34.375, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=36.0335195530726, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI28575014, Length=372, Percent_Identity=34.4086021505376, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI24666101, Length=389, Percent_Identity=37.0179948586118, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI24583281, Length=370, Percent_Identity=30.8108108108108, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24583279, Length=370, Percent_Identity=30.8108108108108, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=33.3333333333333, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI281365720, Length=324, Percent_Identity=38.2716049382716, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24581954, Length=377, Percent_Identity=30.7692307692308, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581952, Length=377, Percent_Identity=30.7692307692308, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581956, Length=377, Percent_Identity=30.7692307692308, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI17136814, Length=400, Percent_Identity=34.25, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24642822, Length=467, Percent_Identity=30.1927194860814, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI20130173, Length=436, Percent_Identity=30.9633027522936, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24643725, Length=399, Percent_Identity=29.3233082706767, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI28571808, Length=344, Percent_Identity=33.4302325581395, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI28571809, Length=344, Percent_Identity=33.4302325581395, Blast_Score=158, Evalue=8e-39, Organism=Drosophila melanogaster, GI17647335, Length=387, Percent_Identity=28.1653746770026, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=31.4285714285714, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI21355559, Length=384, Percent_Identity=32.5520833333333, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI17136666, Length=448, Percent_Identity=25.6696428571429, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI24640164, Length=340, Percent_Identity=25.2941176470588, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=26.9113149847095, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI28571338, Length=225, Percent_Identity=30.2222222222222, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI18859659, Length=225, Percent_Identity=30.2222222222222, Blast_Score=97, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 54613; Mature: 54482
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLKALKKMFGKSEAEQLAPVPTAPSHAAGHRNDASKADRQTPATPPKQEPKPAPAAAP CHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC ATEPARSETPKPARPRREPKPKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIHDL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHEEECCCCCCCHHHHHCCCHHHHHHHHHC GFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRA CCCCCCCCHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCE LIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL EEEECHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHCCEEEEECCCCEE DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVM ECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHH NLAKQWTTDPAIVEIEVTNVANENVEQHIYAVAGADKYKLLFNLVNDNGWERVIVFANRK HHHHHHCCCCEEEEEEEECCCCCCHHHHEEEECCCCCEEEEEEECCCCCCEEEEEEECCH DEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGIS HHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHH HVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPT HHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCEEECCCCHH HLLRAVERKRPQ HHHHHHHHCCCC >Mature Secondary Structure TVLKALKKMFGKSEAEQLAPVPTAPSHAAGHRNDASKADRQTPATPPKQEPKPAPAAAP HHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCC ATEPARSETPKPARPRREPKPKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIHDL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHEEECCCCCCCHHHHHCCCHHHHHHHHHC GFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRA CCCCCCCCHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCE LIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL EEEECHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHCCEEEEECCCCEE DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVM ECCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHH NLAKQWTTDPAIVEIEVTNVANENVEQHIYAVAGADKYKLLFNLVNDNGWERVIVFANRK HHHHHHCCCCEEEEEEEECCCCCCHHHHEEEECCCCCEEEEEEECCCCCCEEEEEEECCH DEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGIS HHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHH HVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPT HHHHCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCEEECCCCHH HLLRAVERKRPQ HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]