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The map label for this gene is arcB [H]

Identifier: 77457197

GI number: 77457197

Start: 1129676

End: 1130620

Strand: Reverse

Name: arcB [H]

Synonym: Pfl01_0970

Alternate gene names: 77457197

Gene position: 1130620-1129676 (Counterclockwise)

Preceding gene: 255961279

Following gene: 77457196

Centisome position: 17.56

GC content: 63.49

Gene sequence:

>945_bases
ATGTCCAGTACGCCTTACGTGATCGACCAAACCCAGGCCCGCGAGCTGTTGGCCCGGATCGATGTGCCGCAGATCCTGCG
CAAGCTGTTCCGTGATCTGGCGGCCGGGCATGCGGTGCAACCGGCGCAGCAACTGGTGGAATTTCCTCAGGGTGCCGGGG
ACTTCATCAACTATCTGGGCGTGCTGGCGGAAGACGGCGTGTACGGGGTCAAGACTTCGCCTTACATCGTTCGCGAACAA
GGCCCGCTGGTGACGGCGTGGACATTGCTGATGTCGATGCAGACCGGCCAGCCGTTGCTGCTCTGCGATGCCCGCGAACT
GACCACCGCCCGAACCGCTGCGACCACGGCCGTGGCGGTCGATGCCCTCGCCCCGTTGAACGCCACGCGTCTGGCAATCA
TCGGCAGCGGCAAGGTCGCCCAGGCGCACCTGCATTACGTCAAGATGTTGCGCGACTGGCAGAACATCAGCGTGTACTCG
CCTACCTTGAGCGAAGACCCGGCAACCATCCGCCAACTGCAAGCCCTCGATCCACGTGTGACCATTGCCGACAGCCGTGA
AGCCGCCATCGCCGAGGCCGACGTGATCATGCTCTGCACCTCGTCCGCAGGGCCTGTGATCGACCCGGCAAACTTGAGCA
AACCGGCGCTGATCACCTCGATCAGCACCAACGCACCGCGCGCCCATGAAGTGCCACCGCAAAGCCTCAACGACATGCAG
GTGTTCTGCGACTATCGTCTGACCACCCCGGGCTCGGCCGGCGAGATGCTGATCGCCAGCGAGCGACATGACTGGGACAG
CGGCGCGATCCTCGGTGACCTGGCGGATCTGCTCAGCGGAAAAGTGCAGCGCCCCGATTACCACCGCCACGTGTTTTTCC
GCTCCATCGGTCTGGGCCTGGAAGACATCGCCCTGGCCAACGCCGTCTATCAATTGCAGCGCTGA

Upstream 100 bases:

>100_bases
CCGGCAACGGACTGCGCTTTTTTTTCGCCCGGATATTGTTCAATAATACTAAAAGTCCATAATAGACAAATTAGTTTATA
AACAGTCTTCGGAGTCCGGC

Downstream 100 bases:

>100_bases
CACCGGAGATTTTCATGAGTCATGCAGATTTCATCATCATCGGCGGCGGGATTGCCGGTGCTTCCACCGGTTTCTGGCTG
TCGCAGCACGGCAAGGTCGT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSSTPYVIDQTQARELLARIDVPQILRKLFRDLAAGHAVQPAQQLVEFPQGAGDFINYLGVLAEDGVYGVKTSPYIVREQ
GPLVTAWTLLMSMQTGQPLLLCDARELTTARTAATTAVAVDALAPLNATRLAIIGSGKVAQAHLHYVKMLRDWQNISVYS
PTLSEDPATIRQLQALDPRVTIADSREAAIAEADVIMLCTSSAGPVIDPANLSKPALITSISTNAPRAHEVPPQSLNDMQ
VFCDYRLTTPGSAGEMLIASERHDWDSGAILGDLADLLSGKVQRPDYHRHVFFRSIGLGLEDIALANAVYQLQR

Sequences:

>Translated_314_residues
MSSTPYVIDQTQARELLARIDVPQILRKLFRDLAAGHAVQPAQQLVEFPQGAGDFINYLGVLAEDGVYGVKTSPYIVREQ
GPLVTAWTLLMSMQTGQPLLLCDARELTTARTAATTAVAVDALAPLNATRLAIIGSGKVAQAHLHYVKMLRDWQNISVYS
PTLSEDPATIRQLQALDPRVTIADSREAAIAEADVIMLCTSSAGPVIDPANLSKPALITSISTNAPRAHEVPPQSLNDMQ
VFCDYRLTTPGSAGEMLIASERHDWDSGAILGDLADLLSGKVQRPDYHRHVFFRSIGLGLEDIALANAVYQLQR
>Mature_313_residues
SSTPYVIDQTQARELLARIDVPQILRKLFRDLAAGHAVQPAQQLVEFPQGAGDFINYLGVLAEDGVYGVKTSPYIVREQG
PLVTAWTLLMSMQTGQPLLLCDARELTTARTAATTAVAVDALAPLNATRLAIIGSGKVAQAHLHYVKMLRDWQNISVYSP
TLSEDPATIRQLQALDPRVTIADSREAAIAEADVIMLCTSSAGPVIDPANLSKPALITSISTNAPRAHEVPPQSLNDMQV
FCDYRLTTPGSAGEMLIASERHDWDSGAILGDLADLLSGKVQRPDYHRHVFFRSIGLGLEDIALANAVYQLQR

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=323, Percent_Identity=23.8390092879257, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI62241008, Length=281, Percent_Identity=24.1992882562278, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34049; Mature: 33918

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTPYVIDQTQARELLARIDVPQILRKLFRDLAAGHAVQPAQQLVEFPQGAGDFINYLG
CCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHH
VLAEDGVYGVKTSPYIVREQGPLVTAWTLLMSMQTGQPLLLCDARELTTARTAATTAVAV
HHHCCCEEECCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
DALAPLNATRLAIIGSGKVAQAHLHYVKMLRDWQNISVYSPTLSEDPATIRQLQALDPRV
HHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCE
TIADSREAAIAEADVIMLCTSSAGPVIDPANLSKPALITSISTNAPRAHEVPPQSLNDMQ
EEECCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEE
VFCDYRLTTPGSAGEMLIASERHDWDSGAILGDLADLLSGKVQRPDYHRHVFFRSIGLGL
EEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCH
EDIALANAVYQLQR
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SSTPYVIDQTQARELLARIDVPQILRKLFRDLAAGHAVQPAQQLVEFPQGAGDFINYLG
CCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHH
VLAEDGVYGVKTSPYIVREQGPLVTAWTLLMSMQTGQPLLLCDARELTTARTAATTAVAV
HHHCCCEEECCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHH
DALAPLNATRLAIIGSGKVAQAHLHYVKMLRDWQNISVYSPTLSEDPATIRQLQALDPRV
HHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCCE
TIADSREAAIAEADVIMLCTSSAGPVIDPANLSKPALITSISTNAPRAHEVPPQSLNDMQ
EEECCCCCHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEE
VFCDYRLTTPGSAGEMLIASERHDWDSGAILGDLADLLSGKVQRPDYHRHVFFRSIGLGL
EEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCH
EDIALANAVYQLQR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]