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The map label for this gene is yvaP

Identifier: 255767766

GI number: 255767766

Start: 3457615

End: 3457941

Strand: Direct

Name: yvaP

Synonym: BSU33680

Alternate gene names: 255767766

Gene position: 3457615-3457941 (Clockwise)

Preceding gene: 16080420

Following gene: 16080422

Centisome position: 82.02

GC content: 43.73

Gene sequence:

>327_bases
ATGAACCAATCAGAAATGTGTCCTAGATTTGAAAAAGCAGTCGACATCTTAAGTAAACGCTGGGTCGCTTTAATCGTATT
TCAGCTCTTGAACGGGTCGCAGCGATTTAGCGAAATTGAAGCAGCACTTCCAAATCTAAGCGGCAGAGTTCTGTCAGAAC
GGCTGAAAGAACTTGAGCTTGAAGGAGTAGTGAAGCGGGATGTCATCCCTGAAACTCCGGTTCGCATCGAATATTCATTG
ACTGATAAAGGAAAGGCACTAGCACCCATATTAGGTGAGATTTCTAAATGGGCGACTGAATGGATTGACCCTTCCTTTCT
TGACTAA

Upstream 100 bases:

>100_bases
TCCTCATAATCCCCTGTTTCTCTTTCTATATTTTATCAATCACGCTTGCATGCCCTCCCTCGTTATTTGCGTTATAATAG
TGACAGACGAGGTGAAAAGT

Downstream 100 bases:

>100_bases
TTGCTAAAATGGTTCTGATCTCAAAGACGAGAAAAGAACCGTTTTTTATTTTCCAGGTGAAAAAAAGATATCTCAGCCGA
TATATAGTACATCCACACAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRVLSERLKELELEGVVKRDVIPETPVRIEYSL
TDKGKALAPILGEISKWATEWIDPSFLD

Sequences:

>Translated_108_residues
MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRVLSERLKELELEGVVKRDVIPETPVRIEYSL
TDKGKALAPILGEISKWATEWIDPSFLD
>Mature_108_residues
MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRVLSERLKELELEGVVKRDVIPETPVRIEYSL
TDKGKALAPILGEISKWATEWIDPSFLD

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVAP_BACSU (O32238)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_391248.2
- HSSP:   Q7M7B7
- ProteinModelPortal:   O32238
- SMR:   O32238
- EnsemblBacteria:   EBBACT00000082637
- GeneID:   938478
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33680
- GenoList:   BSU33680
- GeneTree:   EBGT00070000031997
- ProtClustDB:   CLSK980605
- BioCyc:   BSUB:BSU33680-MONOMER
- GO:   GO:0006350
- InterPro:   IPR002577
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF01638 DUF24

EC number: NA

Molecular weight: Translated: 12271; Mature: 12271

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRVLSERLKELEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EGVVKRDVIPETPVRIEYSLTDKGKALAPILGEISKWATEWIDPSFLD
HHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRVLSERLKELEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EGVVKRDVIPETPVRIEYSLTDKGKALAPILGEISKWATEWIDPSFLD
HHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377