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The map label for this gene is yvaQ

Identifier: 16080422

GI number: 16080422

Start: 3458066

End: 3459766

Strand: Direct

Name: yvaQ

Synonym: BSU33690

Alternate gene names: 16080422

Gene position: 3458066-3459766 (Clockwise)

Preceding gene: 255767766

Following gene: 255767767

Centisome position: 82.03

GC content: 43.8

Gene sequence:

>1701_bases
ATGCGACTGACGATTTCCCGCAAATTCAGCCTGGTATTTTTGACACTGATCCTGATCAATTTACTTGTAGGCGGAATAGG
CGTTCTTAATATGCAGCATATCATTCAAAAAACAGATGAAATCAACACAAAATGGATTGACGGCATCAAAGGAATCACTT
CAATTAATTATGTAACCGAGCACCTGTCTTCTAAAGAAAAGGACTTTCTGATTTATACAGACAAAAGTAAAATGGATACA
CTTGATCAAGAAATGAATCAAATCATGGAAGACATTAACCAAAAGCTCGATAACTACGAAAAAACGATCTCCACTGATAA
AGAGCAGAAACTGTTCGAGCAGCTTCAAACTAAAGTGAATACCTATATGGATATTCATGCGCAAATTATCGAAAGCGGCC
GCACGAATGACATGGACAAAGCAAGAGGTTTATTGGTTCAGACTGAGGCCAGCTTTGAGGATATGAAAAAAACAATCACT
CAGCTTGTTGACTTAAATCAAGAAGGCAGCAACACAGCGGTAAAAGAAACGAAGGCCGTCTATCATAAAGGGCTCATTTA
CACTGCTTTGCTTGTGGCAGCATCAATCCTCATCAGCATTTTCATCTGGCTTTATATCACGCGAAACATTGTAAAGCCTA
TCATTCGCATGAAGGAATCTGCCAATCATATTGCCGAAGGCGATTTGTCGAACGATATGGAGGCCCTCAACTCAAAAGAC
GAGCTGGGTGATCTGAATGAAGCGCTGCAAAAAATGGTAGGGAATCTGAGAGATATTGTCGGATATTCTAAAGACATATC
AAGCCGGGTTCTTTCTTCTTCACAGGTGCTTGCAACCGCAACGAATGAAACAAGATCCGGCAGCAAACATATTACCGAGA
CGATGAACGAAATGGCTGAGGGCTCTGAACAGCAGGCCCAAGACGCGGTGACGATTGCCGAATCGATGAATGAGTTTACC
GAAAGCATTGATAAAGCCTATAATCACGGCATCACAATCAGCGATACGTCTCAAAACGTTCTCGAACTCGCGGTAAGCGG
GAACGAAAATATGGCTACGTCATTACAGCAAATGAAAACCATCCATCATATTGTTGAAGAAGCCGTGCATAAAGTGAGAT
CACTGGAACAGCATTCTCAGGATATTAACAAGCTCGTTCAGGTCATCAACGGGATTGCCGAGCAGACGAATTTGCTGTCC
CTTAACGCCGCGATTGAAGCTGCCCGCGCTGGAGAAAGCGGCAAAGGCTTCGCCGTTGTGGCAGAGGAGGTCAGAAAGCT
GGCTGACGGCGTTTCTGATTCCGTGCAGGACATTACCCGGATTGTAAACGGGACACAGCAGGAGATCCACACTGTCATTA
CGTACTTGGAAAGCAGCTTTACAGAAGTCGAAAAAGGAACGGAAAACCTGACAGACACCGGACAGGCTATGCAGCATATC
AAACAATCCGTCACCCATGTTGCAGACAGCATTAAGGAAGTAACGGATGGCTTGAAGCAGTTAACAAACCAATCGATTAC
CATCAATCAATCGATTGAAAATATCGCTTCTGTATCCGAAGAGTCTGCCGCCGGCATTGAAGAAACATTTTCAATTACCG
AGCAATCCGCCCATTCGATGGATCAAGTGCTTCTAAATGCTGAAGAGCTTGAGCAGCTGGCCAATGAGCTTAATGAGAAG
ATGGGTCAGTTTACGATTTAA

Upstream 100 bases:

>100_bases
AGACGAGAAAAGAACCGTTTTTTATTTTCCAGGTGAAAAAAAGATATCTCAGCCGATATATAGTACATCCACACATTACG
TTTTTAAAGGAGACCACTAT

Downstream 100 bases:

>100_bases
AGAGAAAAAAGAGGCTGGACTCCAGCCTCTTTTTCTATTCTATGCAGCTGATTGAACATGTTTCGCCCCGGTTCTTTTTT
TCTTCACCGGACTTAATGCC

Product: methyl-accepting transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRLTISRKFSLVFLTLILINLLVGGIGVLNMQHIIQKTDEINTKWIDGIKGITSINYVTEHLSSKEKDFLIYTDKSKMDT
LDQEMNQIMEDINQKLDNYEKTISTDKEQKLFEQLQTKVNTYMDIHAQIIESGRTNDMDKARGLLVQTEASFEDMKKTIT
QLVDLNQEGSNTAVKETKAVYHKGLIYTALLVAASILISIFIWLYITRNIVKPIIRMKESANHIAEGDLSNDMEALNSKD
ELGDLNEALQKMVGNLRDIVGYSKDISSRVLSSSQVLATATNETRSGSKHITETMNEMAEGSEQQAQDAVTIAESMNEFT
ESIDKAYNHGITISDTSQNVLELAVSGNENMATSLQQMKTIHHIVEEAVHKVRSLEQHSQDINKLVQVINGIAEQTNLLS
LNAAIEAARAGESGKGFAVVAEEVRKLADGVSDSVQDITRIVNGTQQEIHTVITYLESSFTEVEKGTENLTDTGQAMQHI
KQSVTHVADSIKEVTDGLKQLTNQSITINQSIENIASVSEESAAGIEETFSITEQSAHSMDQVLLNAEELEQLANELNEK
MGQFTI

Sequences:

>Translated_566_residues
MRLTISRKFSLVFLTLILINLLVGGIGVLNMQHIIQKTDEINTKWIDGIKGITSINYVTEHLSSKEKDFLIYTDKSKMDT
LDQEMNQIMEDINQKLDNYEKTISTDKEQKLFEQLQTKVNTYMDIHAQIIESGRTNDMDKARGLLVQTEASFEDMKKTIT
QLVDLNQEGSNTAVKETKAVYHKGLIYTALLVAASILISIFIWLYITRNIVKPIIRMKESANHIAEGDLSNDMEALNSKD
ELGDLNEALQKMVGNLRDIVGYSKDISSRVLSSSQVLATATNETRSGSKHITETMNEMAEGSEQQAQDAVTIAESMNEFT
ESIDKAYNHGITISDTSQNVLELAVSGNENMATSLQQMKTIHHIVEEAVHKVRSLEQHSQDINKLVQVINGIAEQTNLLS
LNAAIEAARAGESGKGFAVVAEEVRKLADGVSDSVQDITRIVNGTQQEIHTVITYLESSFTEVEKGTENLTDTGQAMQHI
KQSVTHVADSIKEVTDGLKQLTNQSITINQSIENIASVSEESAAGIEETFSITEQSAHSMDQVLLNAEELEQLANELNEK
MGQFTI
>Mature_566_residues
MRLTISRKFSLVFLTLILINLLVGGIGVLNMQHIIQKTDEINTKWIDGIKGITSINYVTEHLSSKEKDFLIYTDKSKMDT
LDQEMNQIMEDINQKLDNYEKTISTDKEQKLFEQLQTKVNTYMDIHAQIIESGRTNDMDKARGLLVQTEASFEDMKKTIT
QLVDLNQEGSNTAVKETKAVYHKGLIYTALLVAASILISIFIWLYITRNIVKPIIRMKESANHIAEGDLSNDMEALNSKD
ELGDLNEALQKMVGNLRDIVGYSKDISSRVLSSSQVLATATNETRSGSKHITETMNEMAEGSEQQAQDAVTIAESMNEFT
ESIDKAYNHGITISDTSQNVLELAVSGNENMATSLQQMKTIHHIVEEAVHKVRSLEQHSQDINKLVQVINGIAEQTNLLS
LNAAIEAARAGESGKGFAVVAEEVRKLADGVSDSVQDITRIVNGTQQEIHTVITYLESSFTEVEKGTENLTDTGQAMQHI
KQSVTHVADSIKEVTDGLKQLTNQSITINQSIENIASVSEESAAGIEETFSITEQSAHSMDQVLLNAEELEQLANELNEK
MGQFTI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain

Homologues:

Organism=Escherichia coli, GI2367378, Length=369, Percent_Identity=28.7262872628726, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1788194, Length=394, Percent_Identity=28.9340101522843, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1789453, Length=340, Percent_Identity=29.1176470588235, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1788195, Length=292, Percent_Identity=27.7397260273973, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787690, Length=352, Percent_Identity=26.7045454545455, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVAQ_BACSU (O32239)

Other databases:

- EMBL:   AL009126
- PIR:   F70028
- RefSeq:   NP_391249.1
- HSSP:   P02942
- ProteinModelPortal:   O32239
- EnsemblBacteria:   EBBACT00000004000
- GeneID:   938479
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33690
- NMPDR:   fig|224308.1.peg.3375
- GenoList:   BSU33690
- GeneTree:   EBGT00070000031772
- OMA:   AMENISE
- BioCyc:   BSUB:BSU33690-MONOMER
- GO:   GO:0006935
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- PRINTS:   PR00260
- SMART:   SM00304
- SMART:   SM00283

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal

EC number: NA

Molecular weight: Translated: 62832; Mature: 62832

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1; PS50111 CHEMOTAXIS_TRANSDUC_2; PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x120e8210)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTISRKFSLVFLTLILINLLVGGIGVLNMQHIIQKTDEINTKWIDGIKGITSINYVTE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
HLSSKEKDFLIYTDKSKMDTLDQEMNQIMEDINQKLDNYEKTISTDKEQKLFEQLQTKVN
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TYMDIHAQIIESGRTNDMDKARGLLVQTEASFEDMKKTITQLVDLNQEGSNTAVKETKAV
HHHHHHHHHHHCCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
YHKGLIYTALLVAASILISIFIWLYITRNIVKPIIRMKESANHIAEGDLSNDMEALNSKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCH
ELGDLNEALQKMVGNLRDIVGYSKDISSRVLSSSQVLATATNETRSGSKHITETMNEMAE
HCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHHC
GSEQQAQDAVTIAESMNEFTESIDKAYNHGITISDTSQNVLELAVSGNENMATSLQQMKT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHH
IHHIVEEAVHKVRSLEQHSQDINKLVQVINGIAEQTNLLSLNAAIEAARAGESGKGFAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AEEVRKLADGVSDSVQDITRIVNGTQQEIHTVITYLESSFTEVEKGTENLTDTGQAMQHI
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KQSVTHVADSIKEVTDGLKQLTNQSITINQSIENIASVSEESAAGIEETFSITEQSAHSM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DQVLLNAEELEQLANELNEKMGQFTI
HHHHHCHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MRLTISRKFSLVFLTLILINLLVGGIGVLNMQHIIQKTDEINTKWIDGIKGITSINYVTE
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
HLSSKEKDFLIYTDKSKMDTLDQEMNQIMEDINQKLDNYEKTISTDKEQKLFEQLQTKVN
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
TYMDIHAQIIESGRTNDMDKARGLLVQTEASFEDMKKTITQLVDLNQEGSNTAVKETKAV
HHHHHHHHHHHCCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
YHKGLIYTALLVAASILISIFIWLYITRNIVKPIIRMKESANHIAEGDLSNDMEALNSKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCH
ELGDLNEALQKMVGNLRDIVGYSKDISSRVLSSSQVLATATNETRSGSKHITETMNEMAE
HCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHHHHC
GSEQQAQDAVTIAESMNEFTESIDKAYNHGITISDTSQNVLELAVSGNENMATSLQQMKT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHH
IHHIVEEAVHKVRSLEQHSQDINKLVQVINGIAEQTNLLSLNAAIEAARAGESGKGFAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AEEVRKLADGVSDSVQDITRIVNGTQQEIHTVITYLESSFTEVEKGTENLTDTGQAMQHI
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
KQSVTHVADSIKEVTDGLKQLTNQSITINQSIENIASVSEESAAGIEETFSITEQSAHSM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DQVLLNAEELEQLANELNEKMGQFTI
HHHHHCHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377