| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618096
Identifier: 239618096
GI number: 239618096
Start: 1855619
End: 1856950
Strand: Reverse
Name: 239618096
Synonym: Kole_1728
Alternate gene names: NA
Gene position: 1856950-1855619 (Counterclockwise)
Preceding gene: 239618097
Following gene: 239618095
Centisome position: 80.66
GC content: 41.52
Gene sequence:
>1332_bases GTGAGGAAAACTATTTTCCTGGTTTCGTTCCTGCTTGTAATCGTTGCTTCTTTTGCTGGCATTTTGGAACTCGCACCAAT GCTACCATCAGATTCTCAGATGATAATAGTGGTAGAAAACCTACCAGGTTCGTACGCGCAATTCAAAAAGCTGACTCTTG GCGACAGCTTGCTCAACCAGCTGGCTCTGGAACAGACAATAAGTCAGCAGATAGAACTGGTTGCTTACAACAATGGTGTT GATCCTTCATCGGTGTATGCAGCGTTGTCCGGTGACCTGGCAATTGCTTCATGGGCTACCTCCGAAAATGAATACAAAAT GATAATAATTCTTGGCCCTATAAATAATCCCAAAAGTGTTGCTTCCGCTCTAAAAAAGGTGCTCGATTTCTTTTTACCCT TTGAATTTGAAATACTGGTCGACTCGAACTATCTGTTTATTGGTAATGTTACCGAATATGCCAATTTGAAAAAAGGCATT TCCGTTGATGCATTGACTGGTGATCTCGAACCCGGCATTTCTTATTTATATATGCGCAACACCGACATCCTTTCAAGAAT GTCCTTCAGATACAGTGACAACCTCCTATTAGGCCAGGGCTACACAATACCTCTATCCGATAAAGCGAAAGAACAAGTCA AGACGCTCTTCTCAGGAATGTCAATAAACGATCTGGAAGAGCTACCACATCTACCTCTTGCTGGATTCATGTTCCGTGCA AATGACCTTCCGGAAGCTGAAGAACTTTTATCCACACAATTGAATTTCTCTCTCATGTCCGAAAAATTGGGCATCTCACA GGATATCCTGAAAAGCATTTCCAGGAATTTAACCGGCACAATCCTCGTTGATATAGATCTCCCCATGGAAGAACTATTTA ACAACCTCTTCGCTGCCCAACAATCAAATGGAAACGCTAACACCGCCCCTACTCTCCCCGTTAAAACCATAAGCCGCATC GGATATATGGGAACTCTCGAAGAAGTTAAAAACGCGCTATCTGCCAAAGAAGTGGATGTCACTATCAATGAGGACGTGCT GAAGACCGATAAAAATGTGTTCATATGGAAAAACAACAGATGGCTTTATACCTCAAATCTCGATAAGTCTGAAGCCTATT CTGCTCTTGACAATTCAACGCCTTACACACAAAGTTCTCTGTATCAAAGTTTTTTGAAACTTATGGCAAAAGATAGGTTT TTAACCTTCTTTATGGATACAGGCTATATACTTTCAGCACTCTTCGGTACGGAAATACAAAGTGGAATAATGTCAGCGGC ATGGTATTCAGATGTAAACACCCGGATTGAAGGACTAATGGTTATTAAGTAG
Upstream 100 bases:
>100_bases GTGTTGACTATTGAAAACAACACCCATCGAACGATTTTAGGTATCAACCTGTCGAAAATATGAGAACAGTGGTTATGATC AATAGACTGGGGGTGTTTTT
Downstream 100 bases:
>100_bases TAAAAAAAGCCCCCAACAGGCTGAGCGGAGAGCGGATGGGGGCAAGGAACATCTCGTAAAAAATTATACCATCTTCTCCG AAGATAGTCAAGCGTATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MRKTIFLVSFLLVIVASFAGILELAPMLPSDSQMIIVVENLPGSYAQFKKLTLGDSLLNQLALEQTISQQIELVAYNNGV DPSSVYAALSGDLAIASWATSENEYKMIIILGPINNPKSVASALKKVLDFFLPFEFEILVDSNYLFIGNVTEYANLKKGI SVDALTGDLEPGISYLYMRNTDILSRMSFRYSDNLLLGQGYTIPLSDKAKEQVKTLFSGMSINDLEELPHLPLAGFMFRA NDLPEAEELLSTQLNFSLMSEKLGISQDILKSISRNLTGTILVDIDLPMEELFNNLFAAQQSNGNANTAPTLPVKTISRI GYMGTLEEVKNALSAKEVDVTINEDVLKTDKNVFIWKNNRWLYTSNLDKSEAYSALDNSTPYTQSSLYQSFLKLMAKDRF LTFFMDTGYILSALFGTEIQSGIMSAAWYSDVNTRIEGLMVIK
Sequences:
>Translated_443_residues MRKTIFLVSFLLVIVASFAGILELAPMLPSDSQMIIVVENLPGSYAQFKKLTLGDSLLNQLALEQTISQQIELVAYNNGV DPSSVYAALSGDLAIASWATSENEYKMIIILGPINNPKSVASALKKVLDFFLPFEFEILVDSNYLFIGNVTEYANLKKGI SVDALTGDLEPGISYLYMRNTDILSRMSFRYSDNLLLGQGYTIPLSDKAKEQVKTLFSGMSINDLEELPHLPLAGFMFRA NDLPEAEELLSTQLNFSLMSEKLGISQDILKSISRNLTGTILVDIDLPMEELFNNLFAAQQSNGNANTAPTLPVKTISRI GYMGTLEEVKNALSAKEVDVTINEDVLKTDKNVFIWKNNRWLYTSNLDKSEAYSALDNSTPYTQSSLYQSFLKLMAKDRF LTFFMDTGYILSALFGTEIQSGIMSAAWYSDVNTRIEGLMVIK >Mature_443_residues MRKTIFLVSFLLVIVASFAGILELAPMLPSDSQMIIVVENLPGSYAQFKKLTLGDSLLNQLALEQTISQQIELVAYNNGV DPSSVYAALSGDLAIASWATSENEYKMIIILGPINNPKSVASALKKVLDFFLPFEFEILVDSNYLFIGNVTEYANLKKGI SVDALTGDLEPGISYLYMRNTDILSRMSFRYSDNLLLGQGYTIPLSDKAKEQVKTLFSGMSINDLEELPHLPLAGFMFRA NDLPEAEELLSTQLNFSLMSEKLGISQDILKSISRNLTGTILVDIDLPMEELFNNLFAAQQSNGNANTAPTLPVKTISRI GYMGTLEEVKNALSAKEVDVTINEDVLKTDKNVFIWKNNRWLYTSNLDKSEAYSALDNSTPYTQSSLYQSFLKLMAKDRF LTFFMDTGYILSALFGTEIQSGIMSAAWYSDVNTRIEGLMVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49240; Mature: 49240
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTIFLVSFLLVIVASFAGILELAPMLPSDSQMIIVVENLPGSYAQFKKLTLGDSLLNQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH LALEQTISQQIELVAYNNGVDPSSVYAALSGDLAIASWATSENEYKMIIILGPINNPKSV HHHHHHHHHCEEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCHHHH ASALKKVLDFFLPFEFEILVDSNYLFIGNVTEYANLKKGISVDALTGDLEPGISYLYMRN HHHHHHHHHHHCCCEEEEEEECCEEEEECCHHHHHHHCCCEEEEECCCCCCCCEEEEEEC TDILSRMSFRYSDNLLLGQGYTIPLSDKAKEQVKTLFSGMSINDLEELPHLPLAGFMFRA HHHHHHHHHCCCCCEEECCCEEECCCHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHEEEC NDLPEAEELLSTQLNFSLMSEKLGISQDILKSISRNLTGTILVDIDLPMEELFNNLFAAQ CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHH QSNGNANTAPTLPVKTISRIGYMGTLEEVKNALSAKEVDVTINEDVLKTDKNVFIWKNNR CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCE WLYTSNLDKSEAYSALDNSTPYTQSSLYQSFLKLMAKDRFLTFFMDTGYILSALFGTEIQ EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH SGIMSAAWYSDVNTRIEGLMVIK HHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MRKTIFLVSFLLVIVASFAGILELAPMLPSDSQMIIVVENLPGSYAQFKKLTLGDSLLNQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH LALEQTISQQIELVAYNNGVDPSSVYAALSGDLAIASWATSENEYKMIIILGPINNPKSV HHHHHHHHHCEEEEEECCCCCHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCHHHH ASALKKVLDFFLPFEFEILVDSNYLFIGNVTEYANLKKGISVDALTGDLEPGISYLYMRN HHHHHHHHHHHCCCEEEEEEECCEEEEECCHHHHHHHCCCEEEEECCCCCCCCEEEEEEC TDILSRMSFRYSDNLLLGQGYTIPLSDKAKEQVKTLFSGMSINDLEELPHLPLAGFMFRA HHHHHHHHHCCCCCEEECCCEEECCCHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHEEEC NDLPEAEELLSTQLNFSLMSEKLGISQDILKSISRNLTGTILVDIDLPMEELFNNLFAAQ CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHH QSNGNANTAPTLPVKTISRIGYMGTLEEVKNALSAKEVDVTINEDVLKTDKNVFIWKNNR CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCE WLYTSNLDKSEAYSALDNSTPYTQSSLYQSFLKLMAKDRFLTFFMDTGYILSALFGTEIQ EEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH SGIMSAAWYSDVNTRIEGLMVIK HHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA