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The map label for this gene is 239618095

Identifier: 239618095

GI number: 239618095

Start: 1855282

End: 1855506

Strand: Reverse

Name: 239618095

Synonym: Kole_1727

Alternate gene names: NA

Gene position: 1855506-1855282 (Counterclockwise)

Preceding gene: 239618096

Following gene: 239618090

Centisome position: 80.6

GC content: 40.89

Gene sequence:

>225_bases
ATGAGGGTAGATCTTTTTCTTAAAAAGAACAGAATCATAAAAAGAAGAACCCTTGCCAAGCAAGCGGTTGAAAAAGGCTA
CGTTCTTAAAAACGGCCACACAACCAAACCCGGAGTAGCCCTGAAGCCCGGAGACGAGCTAAAAGTTATTTTTTCAAATA
GAGTTATATCGTTGAAAGTTACCGAGGATTTCAGTGCAGAAATCATCGAAGAGGTCAGGAGATGA

Upstream 100 bases:

>100_bases
CCAACAGGCTGAGCGGAGAGCGGATGGGGGCAAGGAACATCTCGTAAAAAATTATACCATCTTCTCCGAAGATAGTCAAG
CGTATACTGAGGTGGTCTCT

Downstream 100 bases:

>100_bases
ATTCTCCTGACCTTATTTTATGAACGTCTCCACGCTCGTCCATAATTGTCATATAGTCTGAGGCTATTTTCAATATCGTT
CCCTTTATCTTCATTCCGGA

Product: RNA-binding S4 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MRVDLFLKKNRIIKRRTLAKQAVEKGYVLKNGHTTKPGVALKPGDELKVIFSNRVISLKVTEDFSAEIIEEVRR

Sequences:

>Translated_74_residues
MRVDLFLKKNRIIKRRTLAKQAVEKGYVLKNGHTTKPGVALKPGDELKVIFSNRVISLKVTEDFSAEIIEEVRR
>Mature_74_residues
MRVDLFLKKNRIIKRRTLAKQAVEKGYVLKNGHTTKPGVALKPGDELKVIFSNRVISLKVTEDFSAEIIEEVRR

Specific function: Unknown

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8493; Mature: 8493

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDLFLKKNRIIKRRTLAKQAVEKGYVLKNGHTTKPGVALKPGDELKVIFSNRVISLKV
CCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEECCCCCEEEEECCCEEEEEE
TEDFSAEIIEEVRR
CCCCCHHHHHHHCC
>Mature Secondary Structure
MRVDLFLKKNRIIKRRTLAKQAVEKGYVLKNGHTTKPGVALKPGDELKVIFSNRVISLKV
CCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEEECCCCCEEEEECCCEEEEEE
TEDFSAEIIEEVRR
CCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA