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The map label for this gene is ydaO [C]

Identifier: 239618090

GI number: 239618090

Start: 1851071

End: 1851994

Strand: Reverse

Name: ydaO [C]

Synonym: Kole_1722

Alternate gene names: 239618090

Gene position: 1851994-1851071 (Counterclockwise)

Preceding gene: 239618095

Following gene: 239618089

Centisome position: 80.45

GC content: 42.21

Gene sequence:

>924_bases
ATGAAATGTAAGAAATGCGGAGCTCAGGCAATTATACATCTCAAACAACATAATATAGCTCTATGTGCGAAACATTATGA
AGAGTTCTTTCTCTCAAGAGTGAAAAAGGCTATACACATGTTCAAGATGTTCGATAAATCCTCTAAAATTCTTGTCGCCG
TATCCGGTGGCAAGGACAGCCTTGTTCTCTGGGACGTTCTTTACAGACTTGAATATCAAACCGAGGGACTCTATATAGAT
CTCGGTATCGGAAGTTATTCCGAAACGTCCAAAGAAAAAGCAAAAAGCTTCGCGAAATCAAGGAACCTCACCTTGCATAT
TGAAGATGTCAGGAAATACCTCCATGGACTTTCCACACCTGAAGCGGCATGGAAGATGCGTCGCAAAACCTGCTCTGTCT
GCGGTCTTGTTAAACGCTATATCATGAATAAATTCTCCCACGAAGGCGATTATAAAGTAATCGCCACAGGGCATAATCTG
GATGACGAGGCAGCCACACTGCTCGGAAACCTGCTTCACTGGCAAACCGGTTATTTGGGAAAGCAATATCCTGTACTTCC
AAAAACTCATGAAAAACTCACTCCAAAGGTAAAGCCATTGATTCTTGTCACGGAGAAGGAGGTTGCCACCTTTGCCATTA
TGAAAGGAATAGAATACATCTTCGAGGAGTGTCCTTCCGCAAGGGGAGCTTCTTCTATCGTATACAAGAGACTGCTGAAC
GATCTCGAGTTATCGCAACCTGGCGCAAAACAACGGTTCCTCATGGATTATTATAAAAACAAAGGGATATTCGATAATGC
CGAAGAAGATTCTGTCAAACTAAACGAATGTTCAAGGTGCGGTTATCCAACAACACAAGAAGTGTGTTCATTCTGTAAAC
TCACTGAACGCCTGGAGCAAAAGCTAAATGAAAAAAGAACATGA

Upstream 100 bases:

>100_bases
AAATATAATAACCCTTCTGATGATAGAATTATACAACGTGGGAAGAAGGTAAACTACCCTTTAGAACCCTGGAACATCTT
CCAGAAAGGTTGTGAACGGT

Downstream 100 bases:

>100_bases
TGTGATTCTCTTTCTGTCCTACATAATTATTTTAGTTTTCGGGCTGACCATTCTATACAGCGTAACATGGGGGAGGAGAT
TCTCCTATCTCTTTTACAGA

Product: PP-loop domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKCKKCGAQAIIHLKQHNIALCAKHYEEFFLSRVKKAIHMFKMFDKSSKILVAVSGGKDSLVLWDVLYRLEYQTEGLYID
LGIGSYSETSKEKAKSFAKSRNLTLHIEDVRKYLHGLSTPEAAWKMRRKTCSVCGLVKRYIMNKFSHEGDYKVIATGHNL
DDEAATLLGNLLHWQTGYLGKQYPVLPKTHEKLTPKVKPLILVTEKEVATFAIMKGIEYIFEECPSARGASSIVYKRLLN
DLELSQPGAKQRFLMDYYKNKGIFDNAEEDSVKLNECSRCGYPTTQEVCSFCKLTERLEQKLNEKRT

Sequences:

>Translated_307_residues
MKCKKCGAQAIIHLKQHNIALCAKHYEEFFLSRVKKAIHMFKMFDKSSKILVAVSGGKDSLVLWDVLYRLEYQTEGLYID
LGIGSYSETSKEKAKSFAKSRNLTLHIEDVRKYLHGLSTPEAAWKMRRKTCSVCGLVKRYIMNKFSHEGDYKVIATGHNL
DDEAATLLGNLLHWQTGYLGKQYPVLPKTHEKLTPKVKPLILVTEKEVATFAIMKGIEYIFEECPSARGASSIVYKRLLN
DLELSQPGAKQRFLMDYYKNKGIFDNAEEDSVKLNECSRCGYPTTQEVCSFCKLTERLEQKLNEKRT
>Mature_307_residues
MKCKKCGAQAIIHLKQHNIALCAKHYEEFFLSRVKKAIHMFKMFDKSSKILVAVSGGKDSLVLWDVLYRLEYQTEGLYID
LGIGSYSETSKEKAKSFAKSRNLTLHIEDVRKYLHGLSTPEAAWKMRRKTCSVCGLVKRYIMNKFSHEGDYKVIATGHNL
DDEAATLLGNLLHWQTGYLGKQYPVLPKTHEKLTPKVKPLILVTEKEVATFAIMKGIEYIFEECPSARGASSIVYKRLLN
DLELSQPGAKQRFLMDYYKNKGIFDNAEEDSVKLNECSRCGYPTTQEVCSFCKLTERLEQKLNEKRT

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=309, Percent_Identity=26.2135922330097, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17540090, Length=303, Percent_Identity=29.042904290429, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24651972, Length=314, Percent_Identity=31.5286624203822, Blast_Score=119, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 35141; Mature: 35141

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKKCGAQAIIHLKQHNIALCAKHYEEFFLSRVKKAIHMFKMFDKSSKILVAVSGGKDS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
LVLWDVLYRLEYQTEGLYIDLGIGSYSETSKEKAKSFAKSRNLTLHIEDVRKYLHGLSTP
HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCH
EAAWKMRRKTCSVCGLVKRYIMNKFSHEGDYKVIATGHNLDDEAATLLGNLLHWQTGYLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
KQYPVLPKTHEKLTPKVKPLILVTEKEVATFAIMKGIEYIFEECPSARGASSIVYKRLLN
CCCCCCCCCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DLELSQPGAKQRFLMDYYKNKGIFDNAEEDSVKLNECSRCGYPTTQEVCSFCKLTERLEQ
HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHH
KLNEKRT
HHHHCCC
>Mature Secondary Structure
MKCKKCGAQAIIHLKQHNIALCAKHYEEFFLSRVKKAIHMFKMFDKSSKILVAVSGGKDS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
LVLWDVLYRLEYQTEGLYIDLGIGSYSETSKEKAKSFAKSRNLTLHIEDVRKYLHGLSTP
HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCH
EAAWKMRRKTCSVCGLVKRYIMNKFSHEGDYKVIATGHNLDDEAATLLGNLLHWQTGYLG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
KQYPVLPKTHEKLTPKVKPLILVTEKEVATFAIMKGIEYIFEECPSARGASSIVYKRLLN
CCCCCCCCCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DLELSQPGAKQRFLMDYYKNKGIFDNAEEDSVKLNECSRCGYPTTQEVCSFCKLTERLEQ
HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHHHH
KLNEKRT
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]