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The map label for this gene is yhaM [H]

Identifier: 239618029

GI number: 239618029

Start: 1787318

End: 1788370

Strand: Reverse

Name: yhaM [H]

Synonym: Kole_1658

Alternate gene names: 239618029

Gene position: 1788370-1787318 (Counterclockwise)

Preceding gene: 239618030

Following gene: 239618028

Centisome position: 77.68

GC content: 44.54

Gene sequence:

>1053_bases
ATGAAACTTAAGGATATCCTTGGAGAAGAAGTGGTAAAGAAAATAAACGAGACACAAAGATCCGATACCCCCATGCCTTT
CGTTTCCGACCTCAAACCGGGAATGAATGTAACACTGGATCTGAAAGTTATTTCCAAACGTTTACAGCAAACCCGCGATG
GAAAGAAATTTCTTCTCATGACTCTCTCTGATCGCACCGGAACGATAAGGGGAATAGACTGGCATTCTGCAGAAGAAAAC
GATGCAAAAATAGATATAGGTTCGCTCGTCAGGGTTAGAGGGAGAATCGTTGTTTATGAGGAACGACTTCAGCTCAACCT
AGACAGCCAGAATGGTCTCGATCTGCTCAAAGATGGTATGTACGACTCGTCGAGATTTCTCGCAACCACCAAACGAAGTA
TTCCATCAATGTATGAATCTCTGGAAAAGTACCTGAATTCTATCAAAAACGAACCTTTGAAGCAGCTTTTGAAATGCGTT
TTCGAGGAAGACAGAGAATTCGTTGAACATTTCGTCACCTCTCCAGCAGCGGTCACCGTCCATCACGCGTACAAAGGCGG
GCTTTTAGAGCATACGCTGGATGTTGTAGAAATCTGCGATTTTCTCTCAAACAAATATGCAGAATCCCTTGATCGAGATT
TGCTCATAGCTGGCGCGATGCTTCACGATATCGGAAAGGTCAGGGAATATTCGCTCAATCAGGCTGGAATAGATAAAACC
GACGAAGGGGAGCTCATAGGCCATATAACAATCGGTTCGGAAATGATTACGCACTATGCCGGTAGGATTCGCGACTTCCC
GGAAGACCTTCTTATAGAATTGAAACACCTCATTCTGTCGCACCATGGCGAAATGGAGTGGGGGTCACCCGTGGTTCCAA
AAACCACAGAAGCCATAGTTCTCCATATGGCTGACAACCTGGATTCCAAAATCGCGCAGTTCAGAGAAATAGAAAATCGA
GAATCAAACGCTTCTGGTTACGGTTGGAGTAATTACGACAGGTTCTTAAACCGCAGAATCTTCATGAAAAACCGTGACAG
TTCAGCACAATGA

Upstream 100 bases:

>100_bases
GTAGAAGAAATAGCCGATTTACTGAACACAATAAACTACGAAATAACCTGTACAATAACCGCCCGCGTGCCAAGGTTATA
TACTGGAAAGGAGTAATGAA

Downstream 100 bases:

>100_bases
GGTGATATCTTGTCCAAAAAACTCGTTATAGTTGAATCCCCCGCAAAAGCCAAGACCATCGGAAGATACCTTGGCAAGGA
TTACGAGGTAACTTCATCAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKLKDILGEEVVKKINETQRSDTPMPFVSDLKPGMNVTLDLKVISKRLQQTRDGKKFLLMTLSDRTGTIRGIDWHSAEEN
DAKIDIGSLVRVRGRIVVYEERLQLNLDSQNGLDLLKDGMYDSSRFLATTKRSIPSMYESLEKYLNSIKNEPLKQLLKCV
FEEDREFVEHFVTSPAAVTVHHAYKGGLLEHTLDVVEICDFLSNKYAESLDRDLLIAGAMLHDIGKVREYSLNQAGIDKT
DEGELIGHITIGSEMITHYAGRIRDFPEDLLIELKHLILSHHGEMEWGSPVVPKTTEAIVLHMADNLDSKIAQFREIENR
ESNASGYGWSNYDRFLNRRIFMKNRDSSAQ

Sequences:

>Translated_350_residues
MKLKDILGEEVVKKINETQRSDTPMPFVSDLKPGMNVTLDLKVISKRLQQTRDGKKFLLMTLSDRTGTIRGIDWHSAEEN
DAKIDIGSLVRVRGRIVVYEERLQLNLDSQNGLDLLKDGMYDSSRFLATTKRSIPSMYESLEKYLNSIKNEPLKQLLKCV
FEEDREFVEHFVTSPAAVTVHHAYKGGLLEHTLDVVEICDFLSNKYAESLDRDLLIAGAMLHDIGKVREYSLNQAGIDKT
DEGELIGHITIGSEMITHYAGRIRDFPEDLLIELKHLILSHHGEMEWGSPVVPKTTEAIVLHMADNLDSKIAQFREIENR
ESNASGYGWSNYDRFLNRRIFMKNRDSSAQ
>Mature_350_residues
MKLKDILGEEVVKKINETQRSDTPMPFVSDLKPGMNVTLDLKVISKRLQQTRDGKKFLLMTLSDRTGTIRGIDWHSAEEN
DAKIDIGSLVRVRGRIVVYEERLQLNLDSQNGLDLLKDGMYDSSRFLATTKRSIPSMYESLEKYLNSIKNEPLKQLLKCV
FEEDREFVEHFVTSPAAVTVHHAYKGGLLEHTLDVVEICDFLSNKYAESLDRDLLIAGAMLHDIGKVREYSLNQAGIDKT
DEGELIGHITIGSEMITHYAGRIRDFPEDLLIELKHLILSHHGEMEWGSPVVPKTTEAIVLHMADNLDSKIAQFREIENR
ESNASGYGWSNYDRFLNRRIFMKNRDSSAQ

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 39939; Mature: 39939

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKDILGEEVVKKINETQRSDTPMPFVSDLKPGMNVTLDLKVISKRLQQTRDGKKFLLM
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHCCCCCEEEEE
TLSDRTGTIRGIDWHSAEENDAKIDIGSLVRVRGRIVVYEERLQLNLDSQNGLDLLKDGM
EECCCCCEEECCCCCCCCCCCCEEEHHHHHHHHCEEEEEEEEEEEECCCCCCHHHHHCCC
YDSSRFLATTKRSIPSMYESLEKYLNSIKNEPLKQLLKCVFEEDREFVEHFVTSPAAVTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HHAYKGGLLEHTLDVVEICDFLSNKYAESLDRDLLIAGAMLHDIGKVREYSLNQAGIDKT
EHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DEGELIGHITIGSEMITHYAGRIRDFPEDLLIELKHLILSHHGEMEWGSPVVPKTTEAIV
CCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEE
LHMADNLDSKIAQFREIENRESNASGYGWSNYDRFLNRRIFMKNRDSSAQ
EEHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MKLKDILGEEVVKKINETQRSDTPMPFVSDLKPGMNVTLDLKVISKRLQQTRDGKKFLLM
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHHHHHHHHCCCCCEEEEE
TLSDRTGTIRGIDWHSAEENDAKIDIGSLVRVRGRIVVYEERLQLNLDSQNGLDLLKDGM
EECCCCCEEECCCCCCCCCCCCEEEHHHHHHHHCEEEEEEEEEEEECCCCCCHHHHHCCC
YDSSRFLATTKRSIPSMYESLEKYLNSIKNEPLKQLLKCVFEEDREFVEHFVTSPAAVTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HHAYKGGLLEHTLDVVEICDFLSNKYAESLDRDLLIAGAMLHDIGKVREYSLNQAGIDKT
EHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DEGELIGHITIGSEMITHYAGRIRDFPEDLLIELKHLILSHHGEMEWGSPVVPKTTEAIV
CCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEE
LHMADNLDSKIAQFREIENRESNASGYGWSNYDRFLNRRIFMKNRDSSAQ
EEHHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA