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The map label for this gene is 239617070

Identifier: 239617070

GI number: 239617070

Start: 715183

End: 715893

Strand: Reverse

Name: 239617070

Synonym: Kole_0672

Alternate gene names: NA

Gene position: 715893-715183 (Counterclockwise)

Preceding gene: 239617071

Following gene: 239617069

Centisome position: 31.1

GC content: 36.57

Gene sequence:

>711_bases
ATGAAAGTCCTCGTCTTAGATATCTCTAGTGATTATGCTCATTTCAGAAAACCATATACAACTACTTCTGCTCTAACGTA
CTCCATCCCGCCACGTACAGCAGTTCTTGGAATAATTGGTAGTATTCTTGGGATTTCAAGTGGAGGATTTGGAAAAAGTG
AACATTCTAAGTTTTTTGAAACCAACAATGTAAAAACAGGGGTGCGATTGTTAACCTCCATAAAAAAGACGACTTTCAAT
CTTAAATATCTGCACACAAAAAATGGTGGTAGCATCTTGGTTCCTGTTGAATGTGTCGTTTCCCCGATTTACAGGATTTA
TGTATCTGGAAACGAAGATTTTTTGGCAAAGCTAGAAAGTGTGGTTAAAAACAAAGAATGTTATTACACTCCATATCTTG
GAATTTCGGAGTTCTTAGCCTCAGTGAGCTATGTTGGTTTTTTTGAAGGAAAACGTGTTGATGAAATCCCGACGCTTGTG
GATTCGGTAATTTATCTCTTTGATAAAGGTGAAATCAAATTCGAGAGTGGTTTGAATCTTTTCCATGAAACTCATGCTGT
GAGGATGGATTGTGAGAGAAAAGTTCAGGAATACTCGGAAATAGTATATGAAGAGAATGGTAAAAAGATACAACTGTTGA
AAAAATCAGAGAAAACAAGTGTTATTTCTCTTGTCATCGGTGAGCAAAAAGAGGTGATAATGCTTGTCTGA

Upstream 100 bases:

>100_bases
TAGATCCAAGACTCAAGCTAACCTTAAATGGTGAACCTTTCAAAATTGAGAATTTGATTGATGGTAAGATGAAACCGCTG
GCAAAGTGAGGTGAGGGCTT

Downstream 100 bases:

>100_bases
GGTTTATTCACACCCTCCAATGGGAAATGAACCTGGAAGATTATTGATCGACCATCTCAAAGGCGTATATTACCTGATGA
TGTCTGAAATAGAAACTGCA

Product: CRISPR-associated protein Cas5, Hmari subtype

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Hmari Subtype Protein; Cas5h Crispr-Associated Hmari Subtype; CRISPR-Associated Cas5 Family Protein; Crispr-Associated Hmari Subtype; CRISPR-Associated Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKVLVLDISSDYAHFRKPYTTTSALTYSIPPRTAVLGIIGSILGISSGGFGKSEHSKFFETNNVKTGVRLLTSIKKTTFN
LKYLHTKNGGSILVPVECVVSPIYRIYVSGNEDFLAKLESVVKNKECYYTPYLGISEFLASVSYVGFFEGKRVDEIPTLV
DSVIYLFDKGEIKFESGLNLFHETHAVRMDCERKVQEYSEIVYEENGKKIQLLKKSEKTSVISLVIGEQKEVIMLV

Sequences:

>Translated_236_residues
MKVLVLDISSDYAHFRKPYTTTSALTYSIPPRTAVLGIIGSILGISSGGFGKSEHSKFFETNNVKTGVRLLTSIKKTTFN
LKYLHTKNGGSILVPVECVVSPIYRIYVSGNEDFLAKLESVVKNKECYYTPYLGISEFLASVSYVGFFEGKRVDEIPTLV
DSVIYLFDKGEIKFESGLNLFHETHAVRMDCERKVQEYSEIVYEENGKKIQLLKKSEKTSVISLVIGEQKEVIMLV
>Mature_236_residues
MKVLVLDISSDYAHFRKPYTTTSALTYSIPPRTAVLGIIGSILGISSGGFGKSEHSKFFETNNVKTGVRLLTSIKKTTFN
LKYLHTKNGGSILVPVECVVSPIYRIYVSGNEDFLAKLESVVKNKECYYTPYLGISEFLASVSYVGFFEGKRVDEIPTLV
DSVIYLFDKGEIKFESGLNLFHETHAVRMDCERKVQEYSEIVYEENGKKIQLLKKSEKTSVISLVIGEQKEVIMLV

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26507; Mature: 26507

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVLDISSDYAHFRKPYTTTSALTYSIPPRTAVLGIIGSILGISSGGFGKSEHSKFFE
CEEEEEECCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHEE
TNNVKTGVRLLTSIKKTTFNLKYLHTKNGGSILVPVECVVSPIYRIYVSGNEDFLAKLES
CCCCHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEHHHHHCCEEEEEECCCHHHHHHHHH
VVKNKECYYTPYLGISEFLASVSYVGFFEGKRVDEIPTLVDSVIYLFDKGEIKFESGLNL
HHCCCCEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHEECCCCEEECCCCCH
FHETHAVRMDCERKVQEYSEIVYEENGKKIQLLKKSEKTSVISLVIGEQKEVIMLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEEC
>Mature Secondary Structure
MKVLVLDISSDYAHFRKPYTTTSALTYSIPPRTAVLGIIGSILGISSGGFGKSEHSKFFE
CEEEEEECCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHEE
TNNVKTGVRLLTSIKKTTFNLKYLHTKNGGSILVPVECVVSPIYRIYVSGNEDFLAKLES
CCCCHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEHHHHHCCEEEEEECCCHHHHHHHHH
VVKNKECYYTPYLGISEFLASVSYVGFFEGKRVDEIPTLVDSVIYLFDKGEIKFESGLNL
HHCCCCEEECCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHEECCCCEEECCCCCH
FHETHAVRMDCERKVQEYSEIVYEENGKKIQLLKKSEKTSVISLVIGEQKEVIMLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA