Click here to switch to the map view.

The map label for this gene is 239617071

Identifier: 239617071

GI number: 239617071

Start: 715905

End: 716843

Strand: Reverse

Name: 239617071

Synonym: Kole_0673

Alternate gene names: NA

Gene position: 716843-715905 (Counterclockwise)

Preceding gene: 239617072

Following gene: 239617070

Centisome position: 31.14

GC content: 36.53

Gene sequence:

>939_bases
ATGGAATTTATAAAAAACAGACATGAGATTGTGTTCGTTTATGATGTGAAAGATGGAAATCCAAATGGAGATCCATTGGA
TGAAAACAAGCCAAGGATGGATGAAGTAACGGGGGTAAATATAGTTTCAGATGTAAGACTAAAAAAGACATGTCGCGAAT
ACATGATTTCAGCTAATAAAGAAAAAGATGAGTACGAATTTGAAGTTTTTATAAATGGTGACCCCGTCACCTCAGAACAG
AGGGCAAAACAATTGATACCCGACATAACCAGCAAAGAATATGACAGAAAAACTGCTGCAGAGGCACTCCTTAAAAAATG
TATAGATTTAAGACTCTTTGGGGGAACAGTTCCGATTTCTAAGTTAAATATGTCTATGATTGGACCTGTTCAGTTTAGAT
TTGGACGTTCTCTACACAAAGTAGATCCAGTTTTTATTCAAGGGACAGCTGCATTTGCTTCTAAGGAAGATAGAGAAGGA
AGAAGTTTCAGTGAAAAATGGCAACTCCCTTATTCTTGCATAGCATTTTATGGTGTAATAAATCAAAATACAGCTAAGGA
AACTCTTCTTCGTGAAGTCGACATCGATTTCTTCTTCGAAGCCTTGTGGAATGGAACCAGGGACCTTATAACTCGTTCGA
AGATGGAACAGCTTCCCAGGTTGCTTATAGATGTTGTATATAACGATAATGAAAATTTCCATATAGGAGAGCTCGATAAA
GCAATTAAGCTGGTATCCGATCTTCTGGATGAGAAAATAAGAGGGATTTCCGATTTTGTTTTAGAGGTTTCAGAGCTGAA
AGGACTACTTGAAAGATATAACGATAAGATCAAAGAAATTAGATATAGGATAGATCCAAGACTCAAGCTAACCTTAAATG
GTGAACCTTTCAAAATTGAGAATTTGATTGATGGTAAGATGAAACCGCTGGCAAAGTGA

Upstream 100 bases:

>100_bases
CTGACTTAAATTATGCTTTTCTCTGTGGAGAAGCTTCGAAAAGGTTGTTGATGAGTTCAAATGAGAATAAAAAAGAAATT
GAGGATAAGGAGGTATAGAT

Downstream 100 bases:

>100_bases
GGTGAGGGCTTATGAAAGTCCTCGTCTTAGATATCTCTAGTGATTATGCTCATTTCAGAAAACCATATACAACTACTTCT
GCTCTAACGTACTCCATCCC

Product: CRISPR-associated protein, Csh2 family

Products: NA

Alternate protein names: CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Protein; CRISPR-Associated Csd2 Family Protein; Csd2 Family CRISPR-Associated Protein; Crispr-Associated Protein Csh2 Family; Crispr-Protein; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Crispr-Associated Protein; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEFIKNRHEIVFVYDVKDGNPNGDPLDENKPRMDEVTGVNIVSDVRLKKTCREYMISANKEKDEYEFEVFINGDPVTSEQ
RAKQLIPDITSKEYDRKTAAEALLKKCIDLRLFGGTVPISKLNMSMIGPVQFRFGRSLHKVDPVFIQGTAAFASKEDREG
RSFSEKWQLPYSCIAFYGVINQNTAKETLLREVDIDFFFEALWNGTRDLITRSKMEQLPRLLIDVVYNDNENFHIGELDK
AIKLVSDLLDEKIRGISDFVLEVSELKGLLERYNDKIKEIRYRIDPRLKLTLNGEPFKIENLIDGKMKPLAK

Sequences:

>Translated_312_residues
MEFIKNRHEIVFVYDVKDGNPNGDPLDENKPRMDEVTGVNIVSDVRLKKTCREYMISANKEKDEYEFEVFINGDPVTSEQ
RAKQLIPDITSKEYDRKTAAEALLKKCIDLRLFGGTVPISKLNMSMIGPVQFRFGRSLHKVDPVFIQGTAAFASKEDREG
RSFSEKWQLPYSCIAFYGVINQNTAKETLLREVDIDFFFEALWNGTRDLITRSKMEQLPRLLIDVVYNDNENFHIGELDK
AIKLVSDLLDEKIRGISDFVLEVSELKGLLERYNDKIKEIRYRIDPRLKLTLNGEPFKIENLIDGKMKPLAK
>Mature_312_residues
MEFIKNRHEIVFVYDVKDGNPNGDPLDENKPRMDEVTGVNIVSDVRLKKTCREYMISANKEKDEYEFEVFINGDPVTSEQ
RAKQLIPDITSKEYDRKTAAEALLKKCIDLRLFGGTVPISKLNMSMIGPVQFRFGRSLHKVDPVFIQGTAAFASKEDREG
RSFSEKWQLPYSCIAFYGVINQNTAKETLLREVDIDFFFEALWNGTRDLITRSKMEQLPRLLIDVVYNDNENFHIGELDK
AIKLVSDLLDEKIRGISDFVLEVSELKGLLERYNDKIKEIRYRIDPRLKLTLNGEPFKIENLIDGKMKPLAK

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36053; Mature: 36053

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFIKNRHEIVFVYDVKDGNPNGDPLDENKPRMDEVTGVNIVSDVRLKKTCREYMISANK
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC
EKDEYEFEVFINGDPVTSEQRAKQLIPDITSKEYDRKTAAEALLKKCIDLRLFGGTVPIS
CCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHH
KLNMSMIGPVQFRFGRSLHKVDPVFIQGTAAFASKEDREGRSFSEKWQLPYSCIAFYGVI
HCCHHHCCCHHHHHCCHHHHCCCEEEECHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHH
NQNTAKETLLREVDIDFFFEALWNGTRDLITRSKMEQLPRLLIDVVYNDNENFHIGELDK
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
AIKLVSDLLDEKIRGISDFVLEVSELKGLLERYNDKIKEIRYRIDPRLKLTLNGEPFKIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEH
NLIDGKMKPLAK
HHHCCCCCCCCC
>Mature Secondary Structure
MEFIKNRHEIVFVYDVKDGNPNGDPLDENKPRMDEVTGVNIVSDVRLKKTCREYMISANK
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC
EKDEYEFEVFINGDPVTSEQRAKQLIPDITSKEYDRKTAAEALLKKCIDLRLFGGTVPIS
CCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHH
KLNMSMIGPVQFRFGRSLHKVDPVFIQGTAAFASKEDREGRSFSEKWQLPYSCIAFYGVI
HCCHHHCCCHHHHHCCHHHHCCCEEEECHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHH
NQNTAKETLLREVDIDFFFEALWNGTRDLITRSKMEQLPRLLIDVVYNDNENFHIGELDK
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
AIKLVSDLLDEKIRGISDFVLEVSELKGLLERYNDKIKEIRYRIDPRLKLTLNGEPFKIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEH
NLIDGKMKPLAK
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA