Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is 239616589

Identifier: 239616589

GI number: 239616589

Start: 202738

End: 203115

Strand: Direct

Name: 239616589

Synonym: Kole_0181

Alternate gene names: NA

Gene position: 202738-203115 (Clockwise)

Preceding gene: 239616588

Following gene: 239616590

Centisome position: 8.81

GC content: 44.18

Gene sequence:

>378_bases
ATGGCAAAGATCAAGAGCCTCGAAGAACTCATGAAAATAAAGGAGAACGCACTGAAAGAATTGAAAATGAGGGACTCTGA
AAAACGCGGAAAAATTATCGTGGCCATGGGTACCTGCGGAATCGCTGCTGGTGCCAAAGAAACACTGAAAGCCATCGTAG
AAACTCTTAACGAAAAAGGAATAGATGATATAGCTGTTGTTCAGTCCGGCTGTTTCGGGCTCTGTGACGTCGAACCTACG
ATCGAAGTACATATGGAAAATTCTGAGCCTATCATCTACGGCCATGTAACCCCGGCACAGGCAAAGAGAATAATAGAACA
GCACGTTATTGAAGGAAAAGTTGTAGGCGATCTCATAGTGAAGCGTGGAGAACTCTAA

Upstream 100 bases:

>100_bases
GTATGGCACCCGTTGTTCTCGTTGGGGAACGCGACTTTTATGGTAAAGTAACACCAGATGAGGTTTCAGCGATAATCAAA
AAGTACAGGGGGGAGAAGTA

Downstream 100 bases:

>100_bases
GAAGAGGTGATTTAAGTGCCCACAGTAGAAAACACGATCCTTATCTGTGCAGGTGGAGCCTGTATTTCGGCCGGTGAAAA
AAGTGTCAAAGACGCTCTTC

Product: NADP-reducing hydrogenase, subunit B

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase; Ferredoxin-Like Protein; Ferredoxin; NAD(P)-Dependent Iron-Only Hydrogenase Iron-Sulfur Protein; NADP-Reducing Hydrogenase Chain B; Ferredoxin 2Fe-2S; NAD-Reducing Hydrogenase Subunit

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKGIDDIAVVQSGCFGLCDVEPT
IEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIVKRGEL

Sequences:

>Translated_125_residues
MAKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKGIDDIAVVQSGCFGLCDVEPT
IEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIVKRGEL
>Mature_124_residues
AKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKGIDDIAVVQSGCFGLCDVEPTI
EVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIVKRGEL

Specific function: Unknown

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3

Molecular weight: Translated: 13653; Mature: 13522

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
IDDIAVVQSGCFGLCDVEPTIEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIV
CCHHHHHHCCCCEECCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHH
KRGEL
HCCCC
>Mature Secondary Structure 
AKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
IDDIAVVQSGCFGLCDVEPTIEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIV
CCHHHHHHCCCCEECCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHH
KRGEL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA