| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239616589
Identifier: 239616589
GI number: 239616589
Start: 202738
End: 203115
Strand: Direct
Name: 239616589
Synonym: Kole_0181
Alternate gene names: NA
Gene position: 202738-203115 (Clockwise)
Preceding gene: 239616588
Following gene: 239616590
Centisome position: 8.81
GC content: 44.18
Gene sequence:
>378_bases ATGGCAAAGATCAAGAGCCTCGAAGAACTCATGAAAATAAAGGAGAACGCACTGAAAGAATTGAAAATGAGGGACTCTGA AAAACGCGGAAAAATTATCGTGGCCATGGGTACCTGCGGAATCGCTGCTGGTGCCAAAGAAACACTGAAAGCCATCGTAG AAACTCTTAACGAAAAAGGAATAGATGATATAGCTGTTGTTCAGTCCGGCTGTTTCGGGCTCTGTGACGTCGAACCTACG ATCGAAGTACATATGGAAAATTCTGAGCCTATCATCTACGGCCATGTAACCCCGGCACAGGCAAAGAGAATAATAGAACA GCACGTTATTGAAGGAAAAGTTGTAGGCGATCTCATAGTGAAGCGTGGAGAACTCTAA
Upstream 100 bases:
>100_bases GTATGGCACCCGTTGTTCTCGTTGGGGAACGCGACTTTTATGGTAAAGTAACACCAGATGAGGTTTCAGCGATAATCAAA AAGTACAGGGGGGAGAAGTA
Downstream 100 bases:
>100_bases GAAGAGGTGATTTAAGTGCCCACAGTAGAAAACACGATCCTTATCTGTGCAGGTGGAGCCTGTATTTCGGCCGGTGAAAA AAGTGTCAAAGACGCTCTTC
Product: NADP-reducing hydrogenase, subunit B
Products: NAD+; ubiquinol
Alternate protein names: NADH Dehydrogenase; Ferredoxin-Like Protein; Ferredoxin; NAD(P)-Dependent Iron-Only Hydrogenase Iron-Sulfur Protein; NADP-Reducing Hydrogenase Chain B; Ferredoxin 2Fe-2S; NAD-Reducing Hydrogenase Subunit
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MAKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKGIDDIAVVQSGCFGLCDVEPT IEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIVKRGEL
Sequences:
>Translated_125_residues MAKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKGIDDIAVVQSGCFGLCDVEPT IEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIVKRGEL >Mature_124_residues AKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKGIDDIAVVQSGCFGLCDVEPTI EVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIVKRGEL
Specific function: Unknown
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.6.5.3
Molecular weight: Translated: 13653; Mature: 13522
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC IDDIAVVQSGCFGLCDVEPTIEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIV CCHHHHHHCCCCEECCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHH KRGEL HCCCC >Mature Secondary Structure AKIKSLEELMKIKENALKELKMRDSEKRGKIIVAMGTCGIAAGAKETLKAIVETLNEKG CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC IDDIAVVQSGCFGLCDVEPTIEVHMENSEPIIYGHVTPAQAKRIIEQHVIEGKVVGDLIV CCHHHHHHCCCCEECCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHH KRGEL HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H+; ubiquinone
Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA