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The map label for this gene is ydiS [C]

Identifier: 239616553

GI number: 239616553

Start: 162846

End: 163979

Strand: Direct

Name: ydiS [C]

Synonym: Kole_0145

Alternate gene names: 239616553

Gene position: 162846-163979 (Clockwise)

Preceding gene: 239616545

Following gene: 239616568

Centisome position: 7.07

GC content: 43.21

Gene sequence:

>1134_bases
TTGGAAAAAAAAGCCGAGGTTATCATAATCGGTGCAGGCCCGGCCGGAAGTACCGCTGCAACTGTTCTGGCAAGAAGAAA
CTTCGACATTTTACTGATAGATAAGTGCCAATTCCCCCGTGACAAGGTCTGTGGAGGGGTGCTCACCGCCAAGTCTATGA
AACTTCTGGAGAAGATTCATCCCGGGGTTGTATTCTCCCTTAATTTGAAACCAATTACAAAGGTTTCATTTGGGTATCCA
GGTACTGAACGAAAAAACGAATCGATTACCTATATATACAAAAAACCGCTCTTCTATGTTGCGACAAGAAAAGAACTGGA
TAATGCGCTCATGGAAAACGCTCTGAGAAACGGCGCAAAGTATGAAAATGATGCTATTATCCGGATAGAAAGATTGGATG
ACGGATTTATCTGCCACGGTAGAAGCGGTAATACTTATAGTGCCCCATATGTTGTCATAGCCGCAGGTGTCTTTGGACAC
AATCTTCTTGAAAATACATCGAAAATCTCATATTCAATAGCGTACAAAGCACAGACGGCATCCGTACCAATCACCACCGC
AACTATAAACTTTCACGACTTTGGTTATACGTGGATTCTACCGGGAAAAGGGTTTTTCAATGTAGGGATTGGCAGTTACG
ATAATTCCCTCACATACGCTGATGCGGAAAATATTGTCAAGAAGCTCTTTAACTTCCCCATTGGTAAACTCAACGCAGCT
CCATTACCAATGTTTGATAAAACTATCTCCGTAGATCTCAATAACATGGTTCCTGGATGCTTGTTCGTTGGAGATAGCGG
CGGATTCGTGGATCCGTGGACCGGAGAAGGTATATCCTTTGCCATGGAAACAGGTTTTTGCTCGGCTAAAGCGATCATTG
AAAAAGGCGGAGACCGATTGAAGGTTAATGACGACTTCCTTGGCAGAATACGGAGGATTGGAATCCACCTTCAAATAGCC
GGAATCCTCAGGGAAAAACTTACTACAACTCTTCCGGAACGTTTTGATCTACTCTCCGACATCCGAATGGCAAAATTACT
GTATGTGTATCTGAACGGATACCTCAAAGGAATAGATAGACTAATGATAAAAGGCTTCTTCTTTCAGGGAGTTAAGGGTA
TCGAGACCCGTTAA

Upstream 100 bases:

>100_bases
GATTTGAATCACATGTATATTGTAGCATTCATACATATCAGTATGAAAATGGTTGTATAAGTGTTGAAAGAACTATAATA
TAGAATAGGAGGTGTCTTCG

Downstream 100 bases:

>100_bases
GTTCCTTTTAGATTTTTAACCGCTGTTTCGAGCTGTTCCAGAGCTTTTTTGAGTATGGAACGCGGGCAGGCGATGTTCAT
TCGTTGAAATCCTTTACCCT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MEKKAEVIIIGAGPAGSTAATVLARRNFDILLIDKCQFPRDKVCGGVLTAKSMKLLEKIHPGVVFSLNLKPITKVSFGYP
GTERKNESITYIYKKPLFYVATRKELDNALMENALRNGAKYENDAIIRIERLDDGFICHGRSGNTYSAPYVVIAAGVFGH
NLLENTSKISYSIAYKAQTASVPITTATINFHDFGYTWILPGKGFFNVGIGSYDNSLTYADAENIVKKLFNFPIGKLNAA
PLPMFDKTISVDLNNMVPGCLFVGDSGGFVDPWTGEGISFAMETGFCSAKAIIEKGGDRLKVNDDFLGRIRRIGIHLQIA
GILREKLTTTLPERFDLLSDIRMAKLLYVYLNGYLKGIDRLMIKGFFFQGVKGIETR

Sequences:

>Translated_377_residues
MEKKAEVIIIGAGPAGSTAATVLARRNFDILLIDKCQFPRDKVCGGVLTAKSMKLLEKIHPGVVFSLNLKPITKVSFGYP
GTERKNESITYIYKKPLFYVATRKELDNALMENALRNGAKYENDAIIRIERLDDGFICHGRSGNTYSAPYVVIAAGVFGH
NLLENTSKISYSIAYKAQTASVPITTATINFHDFGYTWILPGKGFFNVGIGSYDNSLTYADAENIVKKLFNFPIGKLNAA
PLPMFDKTISVDLNNMVPGCLFVGDSGGFVDPWTGEGISFAMETGFCSAKAIIEKGGDRLKVNDDFLGRIRRIGIHLQIA
GILREKLTTTLPERFDLLSDIRMAKLLYVYLNGYLKGIDRLMIKGFFFQGVKGIETR
>Mature_377_residues
MEKKAEVIIIGAGPAGSTAATVLARRNFDILLIDKCQFPRDKVCGGVLTAKSMKLLEKIHPGVVFSLNLKPITKVSFGYP
GTERKNESITYIYKKPLFYVATRKELDNALMENALRNGAKYENDAIIRIERLDDGFICHGRSGNTYSAPYVVIAAGVFGH
NLLENTSKISYSIAYKAQTASVPITTATINFHDFGYTWILPGKGFFNVGIGSYDNSLTYADAENIVKKLFNFPIGKLNAA
PLPMFDKTISVDLNNMVPGCLFVGDSGGFVDPWTGEGISFAMETGFCSAKAIIEKGGDRLKVNDDFLGRIRRIGIHLQIA
GILREKLTTTLPERFDLLSDIRMAKLLYVYLNGYLKGIDRLMIKGFFFQGVKGIETR

Specific function: Probably Accepts Electrons From Ydiq/Ydir And Reduces A Quinone. [C]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.- [C]

Molecular weight: Translated: 41647; Mature: 41647

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKAEVIIIGAGPAGSTAATVLARRNFDILLIDKCQFPRDKVCGGVLTAKSMKLLEKIH
CCCCCCEEEEECCCCCCHHHHHEEECCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHC
PGVVFSLNLKPITKVSFGYPGTERKNESITYIYKKPLFYVATRKELDNALMENALRNGAK
CCEEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCC
YENDAIIRIERLDDGFICHGRSGNTYSAPYVVIAAGVFGHNLLENTSKISYSIAYKAQTA
CCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCEEEEEEEEEEEC
SVPITTATINFHDFGYTWILPGKGFFNVGIGSYDNSLTYADAENIVKKLFNFPIGKLNAA
CCEEEEEEEEEECCCEEEEECCCCEEEECCCCCCCCEEECCHHHHHHHHHHCCCCCCCCC
PLPMFDKTISVDLNNMVPGCLFVGDSGGFVDPWTGEGISFAMETGFCSAKAIIEKGGDRL
CCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEE
KVNDDFLGRIRRIGIHLQIAGILREKLTTTLPERFDLLSDIRMAKLLYVYLNGYLKGIDR
EECHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIKGFFFQGVKGIETR
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEKKAEVIIIGAGPAGSTAATVLARRNFDILLIDKCQFPRDKVCGGVLTAKSMKLLEKIH
CCCCCCEEEEECCCCCCHHHHHEEECCCCEEEEECCCCCHHHHCCCHHHHHHHHHHHHHC
PGVVFSLNLKPITKVSFGYPGTERKNESITYIYKKPLFYVATRKELDNALMENALRNGAK
CCEEEEEECCEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCC
YENDAIIRIERLDDGFICHGRSGNTYSAPYVVIAAGVFGHNLLENTSKISYSIAYKAQTA
CCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCEEEEEEEEEEEC
SVPITTATINFHDFGYTWILPGKGFFNVGIGSYDNSLTYADAENIVKKLFNFPIGKLNAA
CCEEEEEEEEEECCCEEEEECCCCEEEECCCCCCCCEEECCHHHHHHHHHHCCCCCCCCC
PLPMFDKTISVDLNNMVPGCLFVGDSGGFVDPWTGEGISFAMETGFCSAKAIIEKGGDRL
CCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEE
KVNDDFLGRIRRIGIHLQIAGILREKLTTTLPERFDLLSDIRMAKLLYVYLNGYLKGIDR
EECHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIKGFFFQGVKGIETR
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]