Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is 239616545
Identifier: 239616545
GI number: 239616545
Start: 154792
End: 155457
Strand: Direct
Name: 239616545
Synonym: Kole_0137
Alternate gene names: NA
Gene position: 154792-155457 (Clockwise)
Preceding gene: 239616544
Following gene: 239616553
Centisome position: 6.72
GC content: 41.74
Gene sequence:
>666_bases ATGAAGAAAGTACTGTTAGTTCTCTCTATTGCTGTACTTATTCTTGCATTAACGGGTTGTCCAGGATGGTTCAATTTTGG TGACGTTCAGAAAATGACCATCCCGGAGATAATCGAATGGATCGACACCAACGAAGCGACAGATGTCAGTGAGTTCCTTG TTGAAACAGAAGGAATTGTAACCTATGCTTATTCGTACTATGCTTACATAGTAGATGCAGAAAACAACGGGATAATGTTG AGATCCGATAGTAGCGTAATAGACTTCAGAGACTTCAATCCGGGAGATAAAATTTCAGTAGTGGGTTCACCATACTTTTC TAAATACGGTGAGTACAGACTGGATACAGATACCCCCGGCGGAACGGCAACCCTAATCGAAAAAAATGTAGCACTTCCTG ATCCTTACGTACTTCCAGCAGGTGAAGGGCTAACAGTTGGCTTATTTGGTAAACTTGTTCAGCTTACCGCTAGATACGAT GGAACAGACAGTTATGGACATCATACCTTTAATAATGGTGGCGTTACTGTTACAGTCTTCAAGTACTCAGACATGCCTAG CGATCTTGCAACTAATACTACATACACAATCATGGGCGTTGTTGGACAGAGCTACGGTTACAAACTCTTCGTATGGGATA AAAGTTACGTACTGCCTGCTGAATAA
Upstream 100 bases:
>100_bases AACCAATAGGAGAGTAAGAGAATAACAAAATGATTAACCCTAAATACCTTTGAGGGCTCCCTTTGAGCTCCACTCAATAA ATTAATTAGGAGGTGTGGGT
Downstream 100 bases:
>100_bases TCAGTAAATCCAATAAAAAAGCCTCCCGATAAGGGAGGCTTTTAACAACAGGGGGACAGTCCACTAAGGTACAGTCCCCC TGTTGTTTGGTCTCATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKKVLLVLSIAVLILALTGCPGWFNFGDVQKMTIPEIIEWIDTNEATDVSEFLVETEGIVTYAYSYYAYIVDAENNGIML RSDSSVIDFRDFNPGDKISVVGSPYFSKYGEYRLDTDTPGGTATLIEKNVALPDPYVLPAGEGLTVGLFGKLVQLTARYD GTDSYGHHTFNNGGVTVTVFKYSDMPSDLATNTTYTIMGVVGQSYGYKLFVWDKSYVLPAE
Sequences:
>Translated_221_residues MKKVLLVLSIAVLILALTGCPGWFNFGDVQKMTIPEIIEWIDTNEATDVSEFLVETEGIVTYAYSYYAYIVDAENNGIML RSDSSVIDFRDFNPGDKISVVGSPYFSKYGEYRLDTDTPGGTATLIEKNVALPDPYVLPAGEGLTVGLFGKLVQLTARYD GTDSYGHHTFNNGGVTVTVFKYSDMPSDLATNTTYTIMGVVGQSYGYKLFVWDKSYVLPAE >Mature_221_residues MKKVLLVLSIAVLILALTGCPGWFNFGDVQKMTIPEIIEWIDTNEATDVSEFLVETEGIVTYAYSYYAYIVDAENNGIML RSDSSVIDFRDFNPGDKISVVGSPYFSKYGEYRLDTDTPGGTATLIEKNVALPDPYVLPAGEGLTVGLFGKLVQLTARYD GTDSYGHHTFNNGGVTVTVFKYSDMPSDLATNTTYTIMGVVGQSYGYKLFVWDKSYVLPAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24338; Mature: 24338
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLVLSIAVLILALTGCPGWFNFGDVQKMTIPEIIEWIDTNEATDVSEFLVETEGIV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCEE TYAYSYYAYIVDAENNGIMLRSDSSVIDFRDFNPGDKISVVGSPYFSKYGEYRLDTDTPG EEEEEEEEEEEECCCCCEEEECCCCEEEEECCCCCCEEEEEECCHHHHCCCEEECCCCCC GTATLIEKNVALPDPYVLPAGEGLTVGLFGKLVQLTARYDGTDSYGHHTFNNGGVTVTVF CEEEEEECCCCCCCCEEEECCCCCEEHHHHHHHEEEEECCCCCCCCCCEECCCCEEEEEE KYSDMPSDLATNTTYTIMGVVGQSYGYKLFVWDKSYVLPAE EECCCCCHHHCCCEEEEEEEECCCCCEEEEEECCCEEECCC >Mature Secondary Structure MKKVLLVLSIAVLILALTGCPGWFNFGDVQKMTIPEIIEWIDTNEATDVSEFLVETEGIV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCEE TYAYSYYAYIVDAENNGIMLRSDSSVIDFRDFNPGDKISVVGSPYFSKYGEYRLDTDTPG EEEEEEEEEEEECCCCCEEEECCCCEEEEECCCCCCEEEEEECCHHHHCCCEEECCCCCC GTATLIEKNVALPDPYVLPAGEGLTVGLFGKLVQLTARYDGTDSYGHHTFNNGGVTVTVF CEEEEEECCCCCCCCEEEECCCCCEEHHHHHHHEEEEECCCCCCCCCCEECCCCEEEEEE KYSDMPSDLATNTTYTIMGVVGQSYGYKLFVWDKSYVLPAE EECCCCCHHHCCCEEEEEEEECCCCCEEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA