BacMap

Definition	Eubacterium rectale ATCC 33656, complete genome.
Accession	NC_012781
Length	3,449,685

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The map label for this gene is cshA [H]

Identifier: 238925630

GI number: 238925630

Start: 3120850

End: 3122442

Strand: Reverse

Name: cshA [H]

Synonym: EUBREC_3287

Alternate gene names: 238925630

Gene position: 3122442-3120850 (Counterclockwise)

Preceding gene: 238925631

Following gene: 238925627

Centisome position: 90.51

GC content: 46.14

Gene sequence:

>1593_bases
ATGGAAACAATCAGATTTGACGAATTAGAACTAAACCCTAAGATTTTGCGAGGCATCAAGGATATGGGCTTTGAGGAGGC
AACTCCAATACAGGCTCAGGGAATCCCGGCAGTGCTTTCGGGCAGGGATGTAATCGGACAGGCGCAGACCGGAACAGGAA
AGACAGCAGCCTTTGGTATTCCGGTGCTTGAGAGCGTTGATGCATCAAGTCACAAGACACAGGTTATCATCCTCTCTCCT
ACAAGGGAGCTTGCCATCCAGGTGGCAGATGAAATCAGGAAGCTTGCAAAATATATGCATGGTGTGAAGGTACTTCCGGT
ATACGGAGGACAGGATATCAGCCGCCAGATTAAGGCACTTAAGGGCGGTGTGCAGATTATTATCGGAACCCCGGGGCGTC
TTATGGATCATCTCAGGAGAAAGACAATCAGGCCTGACCATGTAAAGACAATAGTGCTCGACGAGGCAGACGAGATGCTC
AACATGGGCTTTAGGGAGGACATCGAGACAGTGCTCGAATACCTGCCACAGGAGCATCAGACAGTACTCTTCTCGGCAAC
AATGCCAAAGCCTATTTTGGAAATTACAAGAAAATATCAGCATGATGCCATCAACATCAAGATTGTGAAAAAAGAGCTGA
CAGTCGCAAATATCGACCAGTATTACTATGATGTGAAGCGCAAGGACAAGATAGATGTACTCACAAGACTGTTGGATTAC
TATAATCCAAAGCTCTCACTTGTATTCTGCAACACCAAGAAGATGGTCGATGAGCTGGCATATGAGCTTTGCGGGCGCGG
CTACAGTGCAGAGGGACTTCATGGCGATATGAAGCAGGTGCAGAGAGATCGTGTCATGAAGAACTTCAGAAACGGAAAGA
CAGATATTCTTATTGCCACTGATGTCGCAGCGCGCGGAATTGATGTGGATGATGTGGAGGCTGTTTTTAATTATGATCTG
CCTCAGGATGACGAGTATTATGTACATAGAATCGGCCGTACAGGAAGAGCAGGCCGCTGTGGAAAGGCATTCTCCTTTGT
AAAGGGCAAGGAGGTATATAAGCTCAAGGACATACAGCGCTACTGCAAGACAAAAATCTATGCACAGCCAATTCCATCAT
CTGATGATGTTGCCAAAATCAGGGCAGAAAAGATTATGGACCAGATTTCCACCATTATAGATGAGGAAAATCTCACAAGT
GTCATTGATATTATAGAGAATCAGATAAATGAGTCAGATTACACAGCAATGGATATAGCGGCGGCATTTTTATACCAGGC
TATGGGTGCTTCAGAGATATCCACAGCTGAATCAAAGGACGACTATGATTTCCACAATACAGGAGCAGAGGATGGCATGG
TACGTCTGTTTATCAACGTAGGAAAGAAGGACAAGATAAAGCCGGGTGACATTTTAGGTGCCATTGCAGGCGAGTCAGGC
ATGCCTGGCAGGCTTGTCGGTGCAATCGACATGTACGATAAGTATACATTTGTTGAGGTACCGGCTGAGTATGGCAAGGA
AGTGCTTAATGCCATGAAGAATGCGAAGATAAAGGGCCGCTCTGTGAACATGGAGCCTGCAAATTCACGATAG

Upstream 100 bases:

>100_bases
GAAGAAATAATATTTTGTAATTATCTCACAAATATGTTAAAGTGTGCATGTTATAAAAATATGCACACTTTATTTTTTTG
AAAGGAAATATAAAAAATAT

Downstream 100 bases:

>100_bases
CAAAGTCAGGCTTTTCTGATAACGCATCAGCTTTTCTTGTTCTCAGTGGTTCTGAATAGTTACGATGGTTGTATAAAAAA
TACCGGGACACAAAAAGTGT

Product: DEAD/DEAH box helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLESVDASSHKTQVIILSP
TRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKALKGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEML
NMGFREDIETVLEYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY
YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIATDVAARGIDVDDVEAVFNYDL
PQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQRYCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTS
VIDIIENQINESDYTAMDIAAAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG
MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR

Sequences:

>Translated_530_residues
METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLESVDASSHKTQVIILSP
TRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKALKGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEML
NMGFREDIETVLEYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY
YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIATDVAARGIDVDDVEAVFNYDL
PQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQRYCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTS
VIDIIENQINESDYTAMDIAAAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG
MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR
>Mature_530_residues
METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLESVDASSHKTQVIILSP
TRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKALKGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEML
NMGFREDIETVLEYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY
YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIATDVAARGIDVDDVEAVFNYDL
PQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQRYCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTS
VIDIIENQINESDYTAMDIAAAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG
MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=44.4743935309973, Blast_Score=330, Evalue=2e-90,
Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=41.6666666666667, Blast_Score=284, Evalue=2e-76,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=41.9354838709677, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI164664518, Length=387, Percent_Identity=37.2093023255814, Blast_Score=279, Evalue=5e-75,
Organism=Homo sapiens, GI20149629, Length=387, Percent_Identity=35.4005167958656, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI301171475, Length=376, Percent_Identity=39.0957446808511, Blast_Score=248, Evalue=8e-66,
Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=39.0957446808511, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=39.0957446808511, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=38.8297872340425, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=38.8297872340425, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI41327773, Length=343, Percent_Identity=39.067055393586, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=40.4011461318052, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI224593278, Length=418, Percent_Identity=34.688995215311, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=36.8131868131868, Blast_Score=237, Evalue=2e-62,
Organism=Homo sapiens, GI21071032, Length=355, Percent_Identity=36.9014084507042, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI50659095, Length=404, Percent_Identity=34.4059405940594, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=38.1578947368421, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=36.4145658263305, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI4758112, Length=369, Percent_Identity=34.4173441734417, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI18375623, Length=369, Percent_Identity=34.4173441734417, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=38.0681818181818, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=38.0681818181818, Blast_Score=232, Evalue=6e-61,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.4145658263305, Blast_Score=232, Evalue=7e-61,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.4145658263305, Blast_Score=232, Evalue=8e-61,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.4145658263305, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=34.6368715083799, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=36.9509043927649, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=36.6925064599483, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI45446747, Length=365, Percent_Identity=36.4383561643836, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI45446743, Length=365, Percent_Identity=36.4383561643836, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI31542656, Length=369, Percent_Identity=35.5013550135501, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI13129006, Length=405, Percent_Identity=33.5802469135802, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI188035877, Length=364, Percent_Identity=34.3406593406593, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI164419743, Length=398, Percent_Identity=33.4170854271357, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI51094101, Length=398, Percent_Identity=33.4170854271357, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=36.6310160427808, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=33.7988826815642, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=36.3881401617251, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=35.195530726257, Blast_Score=212, Evalue=8e-55,
Organism=Homo sapiens, GI256223453, Length=384, Percent_Identity=33.0729166666667, Blast_Score=209, Evalue=7e-54,
Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=36.0795454545455, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI41327776, Length=387, Percent_Identity=32.0413436692506, Blast_Score=205, Evalue=1e-52,
Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=36.676217765043, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI38327634, Length=398, Percent_Identity=32.9145728643216, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI38569503, Length=355, Percent_Identity=33.5211267605634, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI38569505, Length=355, Percent_Identity=33.5211267605634, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI17505907, Length=398, Percent_Identity=32.1608040201005, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=30.2267002518892, Blast_Score=176, Evalue=6e-44,
Organism=Homo sapiens, GI256773275, Length=385, Percent_Identity=30.9090909090909, Blast_Score=157, Evalue=3e-38,
Organism=Homo sapiens, GI20336298, Length=354, Percent_Identity=30.5084745762712, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=30.7453416149068, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI4826686, Length=332, Percent_Identity=29.2168674698795, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI154759257, Length=126, Percent_Identity=38.8888888888889, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4557365, Length=365, Percent_Identity=24.1095890410959, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI51242943, Length=376, Percent_Identity=25, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI51242947, Length=376, Percent_Identity=25, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI148612816, Length=376, Percent_Identity=24.7340425531915, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87082221, Length=551, Percent_Identity=37.7495462794918, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1787605, Length=373, Percent_Identity=43.4316353887399, Blast_Score=327, Evalue=9e-91,
Organism=Escherichia coli, GI1787016, Length=390, Percent_Identity=40.2564102564103, Blast_Score=299, Evalue=3e-82,
Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=37.7358490566038, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1788930, Length=360, Percent_Identity=38.0555555555556, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI48994977, Length=369, Percent_Identity=24.6612466124661, Blast_Score=82, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=46.3611859838275, Blast_Score=336, Evalue=2e-92,
Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=46.0916442048518, Blast_Score=335, Evalue=3e-92,
Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=41.8032786885246, Blast_Score=320, Evalue=8e-88,
Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=35.9249329758713, Blast_Score=271, Evalue=4e-73,
Organism=Caenorhabditis elegans, GI17537549, Length=354, Percent_Identity=39.2655367231638, Blast_Score=247, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=37.8947368421053, Blast_Score=241, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=37.7049180327869, Blast_Score=241, Evalue=9e-64,
Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=37.7049180327869, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=37.6021798365123, Blast_Score=240, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=37.4647887323944, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=39.4021739130435, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=39.5348837209302, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI86570094, Length=347, Percent_Identity=40.0576368876081, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71982858, Length=345, Percent_Identity=34.4927536231884, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=37.3983739837398, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=32.6424870466321, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI17507945, Length=356, Percent_Identity=36.7977528089888, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.9459459459459, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=33.0578512396694, Blast_Score=212, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=34.0482573726542, Blast_Score=212, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=34.0482573726542, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=35.7723577235772, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17509811, Length=354, Percent_Identity=34.7457627118644, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17536099, Length=379, Percent_Identity=34.8284960422164, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17536101, Length=379, Percent_Identity=34.8284960422164, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=35.0140056022409, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17536103, Length=379, Percent_Identity=34.8284960422164, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=31.0924369747899, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=31.0924369747899, Blast_Score=204, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=32.8571428571429, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17505370, Length=364, Percent_Identity=34.0659340659341, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=31.5789473684211, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17556951, Length=396, Percent_Identity=28.030303030303, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=33.2460732984293, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=36.6834170854271, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=26.525198938992, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=29.7157622739018, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=409, Percent_Identity=27.1393643031785, Blast_Score=138, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI71997889, Length=367, Percent_Identity=28.3378746594005, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.4117647058824, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=431, Percent_Identity=24.3619489559165, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=49.5145631067961, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=26.1261261261261, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25145561, Length=422, Percent_Identity=23.4597156398104, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32564293, Length=357, Percent_Identity=24.6498599439776, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320224, Length=373, Percent_Identity=42.0911528150134, Blast_Score=312, Evalue=8e-86,
Organism=Saccharomyces cerevisiae, GI6322912, Length=377, Percent_Identity=41.3793103448276, Blast_Score=288, Evalue=2e-78,
Organism=Saccharomyces cerevisiae, GI6322323, Length=377, Percent_Identity=41.3793103448276, Blast_Score=288, Evalue=2e-78,
Organism=Saccharomyces cerevisiae, GI6320041, Length=378, Percent_Identity=38.3597883597884, Blast_Score=278, Evalue=2e-75,
Organism=Saccharomyces cerevisiae, GI6324217, Length=350, Percent_Identity=40.2857142857143, Blast_Score=256, Evalue=7e-69,
Organism=Saccharomyces cerevisiae, GI6324778, Length=373, Percent_Identity=39.142091152815, Blast_Score=251, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6324620, Length=387, Percent_Identity=39.0180878552972, Blast_Score=249, Evalue=6e-67,
Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=41.1594202898551, Blast_Score=246, Evalue=8e-66,
Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=38.9502762430939, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=37.3219373219373, Blast_Score=239, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=39.3854748603352, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=35.042735042735, Blast_Score=223, Evalue=8e-59,
Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=35.1800554016621, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=33.4254143646409, Blast_Score=200, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=32.6259946949602, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=415, Percent_Identity=32.289156626506, Blast_Score=192, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=33.8666666666667, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=30.8988764044944, Blast_Score=187, Evalue=5e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=402, Percent_Identity=30.3482587064677, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=29.9043062200957, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=30.1790281329923, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320173, Length=228, Percent_Identity=33.7719298245614, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6324366, Length=402, Percent_Identity=27.363184079602, Blast_Score=116, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6321374, Length=410, Percent_Identity=23.9024390243902, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322876, Length=182, Percent_Identity=30.2197802197802, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6323844, Length=371, Percent_Identity=22.6415094339623, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=45.5525606469003, Blast_Score=333, Evalue=3e-91,
Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81,
Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81,
Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81,
Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=42.8571428571429, Blast_Score=299, Evalue=3e-81,
Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=36.9973190348526, Blast_Score=260, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=36.9973190348526, Blast_Score=259, Evalue=2e-69,
Organism=Drosophila melanogaster, GI28574962, Length=365, Percent_Identity=37.8082191780822, Blast_Score=252, Evalue=5e-67,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=38.9204545454545, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=39.3162393162393, Blast_Score=244, Evalue=9e-65,
Organism=Drosophila melanogaster, GI17985987, Length=395, Percent_Identity=37.4683544303797, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI18857967, Length=358, Percent_Identity=38.8268156424581, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24585582, Length=347, Percent_Identity=36.8876080691643, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI17977678, Length=355, Percent_Identity=36.9014084507042, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=37.2549019607843, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=37.1830985915493, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=38.1201044386423, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=35.0132625994695, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=35.0132625994695, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI21356161, Length=418, Percent_Identity=34.4497607655502, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=35.4570637119114, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24581954, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24581952, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24581956, Length=346, Percent_Identity=34.971098265896, Blast_Score=223, Evalue=4e-58,
Organism=Drosophila melanogaster, GI17136814, Length=373, Percent_Identity=36.7292225201072, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI28571808, Length=352, Percent_Identity=34.9431818181818, Blast_Score=202, Evalue=6e-52,
Organism=Drosophila melanogaster, GI28571809, Length=352, Percent_Identity=34.9431818181818, Blast_Score=202, Evalue=6e-52,
Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=35.9872611464968, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=31.2328767123288, Blast_Score=185, Evalue=6e-47,
Organism=Drosophila melanogaster, GI21355559, Length=412, Percent_Identity=30.5825242718447, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=29.2134831460674, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=29.2134831460674, Blast_Score=165, Evalue=7e-41,
Organism=Drosophila melanogaster, GI24666101, Length=411, Percent_Identity=30.9002433090024, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI20130173, Length=441, Percent_Identity=29.9319727891156, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI24643725, Length=387, Percent_Identity=29.1989664082687, Blast_Score=161, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24642822, Length=364, Percent_Identity=29.3956043956044, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=28.3333333333333, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24668515, Length=367, Percent_Identity=29.9727520435967, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=26.7139479905437, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24640164, Length=392, Percent_Identity=24.234693877551, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646066, Length=361, Percent_Identity=25.7617728531856, Blast_Score=92, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 59379; Mature: 59379

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGI
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCCCEEECC
PVLESVDASSHKTQVIILSPTRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKAL
CHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
KGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEMLNMGFREDIETVLEYLPQEHQ
CCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCCC
TVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY
EEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH
YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIAT
CCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
DVAARGIDVDDVEAVFNYDLPQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQR
CHHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
YCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTSVIDIIENQINESDYTAMDIA
HHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH
AAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG
HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCC
MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR
CCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCC
>Mature Secondary Structure
METIRFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGI
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCCCEEECC
PVLESVDASSHKTQVIILSPTRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQIKAL
CHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
KGGVQIIIGTPGRLMDHLRRKTIRPDHVKTIVLDEADEMLNMGFREDIETVLEYLPQEHQ
CCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCCC
TVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKIDVLTRLLDY
EEEEECCCCHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH
YNPKLSLVFCNTKKMVDELAYELCGRGYSAEGLHGDMKQVQRDRVMKNFRNGKTDILIAT
CCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
DVAARGIDVDDVEAVFNYDLPQDDEYYVHRIGRTGRAGRCGKAFSFVKGKEVYKLKDIQR
CHHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
YCKTKIYAQPIPSSDDVAKIRAEKIMDQISTIIDEENLTSVIDIIENQINESDYTAMDIA
HHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH
AAFLYQAMGASEISTAESKDDYDFHNTGAEDGMVRLFINVGKKDKIKPGDILGAIAGESG
HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCC
MPGRLVGAIDMYDKYTFVEVPAEYGKEVLNAMKNAKIKGRSVNMEPANSR
CCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]