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The map label for this gene is yclJ [H]

Identifier: 238921581

GI number: 238921581

Start: 3620797

End: 3621528

Strand: Reverse

Name: yclJ [H]

Synonym: NT01EI_3734

Alternate gene names: 238921581

Gene position: 3621528-3620797 (Counterclockwise)

Preceding gene: 238921584

Following gene: 238921580

Centisome position: 95.0

GC content: 62.84

Gene sequence:

>732_bases
TTGCTGGGGGAGTCGGTGATGACGGTGAAACGAATTCTGGTGGTAGAGGATGACACGCTGATTGCCGAACTGCTGACGCT
GCATCTGTGCGATGAGGGATACCGGGTGACCCACGCTGCCGACGGCGATCGGGGGATGGCGCTGGTTGAACAGGGTGGAT
GGGACGCGCTGATCCTCGATCTGATGCTACCGGGCGTGGATGGGCTGGATATCTGCCGCCGGGTGCGCACCATGACCCGC
TATACCCCGATCATCATCACCAGCGCCCGATCCAGCGAAGTTCACCGGGTGCTGGGGCTGGAACTGGGAGCCGACGATTA
CCTGGCCAAGCCGTTTTCCATGATTGAGCTGGTCGCCCGGGTAAAGGCGCTGTTTCGTCGCCAGGAGGCAATGGGCCGCA
ACCTGATGCTGGAGGGGGGACGCCTGAGCTATGGCCTGCTGACCATCGACCCCATGGCGCGGGCGGTGTGGGTGGGGGAG
CGGCCGATTGAGCTCACGCCGCGCGAATTCGATCTGCTGTACTTCTTTGCCCGTCACCCCGGGCAGGTATTTTCACGTCT
GCAGCTATTGGACAAGGTGTGGGGATACCAACACGACGGCTACGAGCATACGGTCAATACCCATATTAACCGCCTGCGTA
CCAAGATCGAGGCCGATCCCGCCGAGCCGGCGCTGATCCTGACCGTCTGGGGCGCCGGCTACAGGTTCGCCGACGCCGGG
GGGGCGGTATGA

Upstream 100 bases:

>100_bases
TTGCTTTGATTGAAAGTAAACACCCTGTCGCCATGGTGGCGGGGTTATAAACAAAATGTGATAACTCGCCTCCGGCAGGC
CATGTAGACTGGAAAAAACA

Downstream 100 bases:

>100_bases
GCCGCCTGAGCCTGGCGCAGCGCCTGACGCTGGTGTTTGCCCTGCTGCTGCTGGTGTGCAGCGCCCTGACCGGTTGGCTG
CAGCTGCGCAGTAATACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLGESVMTVKRILVVEDDTLIAELLTLHLCDEGYRVTHAADGDRGMALVEQGGWDALILDLMLPGVDGLDICRRVRTMTR
YTPIIITSARSSEVHRVLGLELGADDYLAKPFSMIELVARVKALFRRQEAMGRNLMLEGGRLSYGLLTIDPMARAVWVGE
RPIELTPREFDLLYFFARHPGQVFSRLQLLDKVWGYQHDGYEHTVNTHINRLRTKIEADPAEPALILTVWGAGYRFADAG
GAV

Sequences:

>Translated_243_residues
MLGESVMTVKRILVVEDDTLIAELLTLHLCDEGYRVTHAADGDRGMALVEQGGWDALILDLMLPGVDGLDICRRVRTMTR
YTPIIITSARSSEVHRVLGLELGADDYLAKPFSMIELVARVKALFRRQEAMGRNLMLEGGRLSYGLLTIDPMARAVWVGE
RPIELTPREFDLLYFFARHPGQVFSRLQLLDKVWGYQHDGYEHTVNTHINRLRTKIEADPAEPALILTVWGAGYRFADAG
GAV
>Mature_243_residues
MLGESVMTVKRILVVEDDTLIAELLTLHLCDEGYRVTHAADGDRGMALVEQGGWDALILDLMLPGVDGLDICRRVRTMTR
YTPIIITSARSSEVHRVLGLELGADDYLAKPFSMIELVARVKALFRRQEAMGRNLMLEGGRLSYGLLTIDPMARAVWVGE
RPIELTPREFDLLYFFARHPGQVFSRLQLLDKVWGYQHDGYEHTVNTHINRLRTKIEADPAEPALILTVWGAGYRFADAG
GAV

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=37.9310344827586, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=41.7391304347826, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=41.5178571428571, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1788394, Length=245, Percent_Identity=39.1836734693878, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=38.0530973451327, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=37.280701754386, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=37.7777777777778, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=37.5, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=34.8214285714286, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=33.4745762711864, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=36.3247863247863, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=32.7659574468085, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=33.4801762114537, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=31.5789473684211, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1790299, Length=130, Percent_Identity=33.0769230769231, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27264; Mature: 27264

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGESVMTVKRILVVEDDTLIAELLTLHLCDEGYRVTHAADGDRGMALVEQGGWDALILD
CCCCHHHHEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCEEEEE
LMLPGVDGLDICRRVRTMTRYTPIIITSARSSEVHRVLGLELGADDYLAKPFSMIELVAR
HHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEEECCCHHHHCHHHHHHHHHH
VKALFRRQEAMGRNLMLEGGRLSYGLLTIDPMARAVWVGERPIELTPREFDLLYFFARHP
HHHHHHHHHHHCCCEEEECCCEEEEEEEECCHHHEEECCCCCCEECCCCEEEEEEECCCH
GQVFSRLQLLDKVWGYQHDGYEHTVNTHINRLRTKIEADPAEPALILTVWGAGYRFADAG
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCC
GAV
CCC
>Mature Secondary Structure
MLGESVMTVKRILVVEDDTLIAELLTLHLCDEGYRVTHAADGDRGMALVEQGGWDALILD
CCCCHHHHEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCEEEEE
LMLPGVDGLDICRRVRTMTRYTPIIITSARSSEVHRVLGLELGADDYLAKPFSMIELVAR
HHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEEECCCHHHHCHHHHHHHHHH
VKALFRRQEAMGRNLMLEGGRLSYGLLTIDPMARAVWVGERPIELTPREFDLLYFFARHP
HHHHHHHHHHHCCCEEEECCCEEEEEEEECCHHHEEECCCCCCEECCCCEEEEEEECCCH
GQVFSRLQLLDKVWGYQHDGYEHTVNTHINRLRTKIEADPAEPALILTVWGAGYRFADAG
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCC
GAV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]