Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is yhiQ [C]
Identifier: 238921584
GI number: 238921584
Start: 3622370
End: 3623122
Strand: Reverse
Name: yhiQ [C]
Synonym: NT01EI_3736
Alternate gene names: 238921584
Gene position: 3623122-3622370 (Counterclockwise)
Preceding gene: 238921585
Following gene: 238921581
Centisome position: 95.04
GC content: 67.86
Gene sequence:
>753_bases ATGGCGGCGGTTCAGCTGCTGGCGGAGGAGGGTGCCGATGCGGCGGCGCTGAGCGCGCTGGCGCAGCGCTGGGGGCTGTG TCATGACGCCGACGCTGTATTGGCGCTGGTGCTGACGCCTCAGCGACTGGAGCTGCGCAAGCTGGATGAGCCGAAGCTGG GGGCCATTTTCGTCGACTTCGTCGGCGGGACGCTGGCGCACCGCCGACGCTTTGGCGGCGGGCGCGGTGAGGCGGTGGCC AAGGCGGTTGGCATCAAAGGCGGCTACCTACCCGATGTGGTCGATGCCACCGCCGGGCTGGGCCGCGATGCGTTTGTACT GGCGTCGTTGGGATGCCGGGTGCGGATGCTGGAGCGTCACCCGGCGGTGGCGGCGTTGCTGGATGACGGTCTACAGCGTG GCTATGCCGATGCGGAGATCGGCCCCTGGCTGCGCGAGCGCTTGACCCTGCTGCACGCCTCCAGTATCGAGGCGTTGGCG ACATTGACGCCCCGCCCCGAGGTGGTCTATCTCGATCCGATGTTTCCTCACCGGCAGAAAAGTGCGCTGGTGAAGAAAGA TATGCGGGTGTTTCAGGCGCTGGTCGGCGCCGATGACGACGCCGATGCCCTGCTGGCGCCGGCGCGCCGTTTGGCAACCA AGCGGGTGGTGGTCAAGCGGCCAGACTATGCGCCGCCGCTGGCTGGCGTCGCAACCCCTAACGCGACCCTGACCAAAAGC CACCGCTTCGACATCTACGCGCCGCTGGCCTGA
Upstream 100 bases:
>100_bases CGCAGGGGGGCTCCGATGAGCCGATGACCCTGTTTAAAGCGTTCCGCGGGCGTGAGCCACAGATCGATGCCATGCTGCGT CATTACGGGATCAAGGGCTG
Downstream 100 bases:
>100_bases TCGTCCGCGCTGCGGAGCAGGCTTAGCCCGACGTCGCCGCCGGGATGTACGCTCGGCAGGGTCTGGCGAGCGTAGCCGCT GCGCTGCATCAGACAGGCGC
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAAVQLLAEEGADAAALSALAQRWGLCHDADAVLALVLTPQRLELRKLDEPKLGAIFVDFVGGTLAHRRRFGGGRGEAVA KAVGIKGGYLPDVVDATAGLGRDAFVLASLGCRVRMLERHPAVAALLDDGLQRGYADAEIGPWLRERLTLLHASSIEALA TLTPRPEVVYLDPMFPHRQKSALVKKDMRVFQALVGADDDADALLAPARRLATKRVVVKRPDYAPPLAGVATPNATLTKS HRFDIYAPLA
Sequences:
>Translated_250_residues MAAVQLLAEEGADAAALSALAQRWGLCHDADAVLALVLTPQRLELRKLDEPKLGAIFVDFVGGTLAHRRRFGGGRGEAVA KAVGIKGGYLPDVVDATAGLGRDAFVLASLGCRVRMLERHPAVAALLDDGLQRGYADAEIGPWLRERLTLLHASSIEALA TLTPRPEVVYLDPMFPHRQKSALVKKDMRVFQALVGADDDADALLAPARRLATKRVVVKRPDYAPPLAGVATPNATLTKS HRFDIYAPLA >Mature_249_residues AAVQLLAEEGADAAALSALAQRWGLCHDADAVLALVLTPQRLELRKLDEPKLGAIFVDFVGGTLAHRRRFGGGRGEAVAK AVGIKGGYLPDVVDATAGLGRDAFVLASLGCRVRMLERHPAVAALLDDGLQRGYADAEIGPWLRERLTLLHASSIEALAT LTPRPEVVYLDPMFPHRQKSALVKKDMRVFQALVGADDDADALLAPARRLATKRVVVKRPDYAPPLAGVATPNATLTKSH RFDIYAPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=244, Percent_Identity=79.5081967213115, Blast_Score=389, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3736_EDWI9 (C5BB22)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002935099.1 - ProteinModelPortal: C5BB22 - GeneID: 7960751 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3736 - OMA: HRVVVKR - ProtClustDB: PRK10742 - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 26778; Mature: 26647
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVQLLAEEGADAAALSALAQRWGLCHDADAVLALVLTPQRLELRKLDEPKLGAIFVDF CHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCHHHHHHCCCCCCCEEEEEH VGGTLAHRRRFGGGRGEAVAKAVGIKGGYLPDVVDATAGLGRDAFVLASLGCRVRMLERH HCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEEHHHC PAVAALLDDGLQRGYADAEIGPWLRERLTLLHASSIEALATLTPRPEVVYLDPMFPHRQK CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCHHH SALVKKDMRVFQALVGADDDADALLAPARRLATKRVVVKRPDYAPPLAGVATPNATLTKS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEECC HRFDIYAPLA CCCEEEECCC >Mature Secondary Structure AAVQLLAEEGADAAALSALAQRWGLCHDADAVLALVLTPQRLELRKLDEPKLGAIFVDF HHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHEEECCCHHHHHHCCCCCCCEEEEEH VGGTLAHRRRFGGGRGEAVAKAVGIKGGYLPDVVDATAGLGRDAFVLASLGCRVRMLERH HCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEEHHHC PAVAALLDDGLQRGYADAEIGPWLRERLTLLHASSIEALATLTPRPEVVYLDPMFPHRQK CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCHHH SALVKKDMRVFQALVGADDDADALLAPARRLATKRVVVKRPDYAPPLAGVATPNATLTKS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEECC HRFDIYAPLA CCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA