| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is malT [H]
Identifier: 238921517
GI number: 238921517
Start: 3553901
End: 3556627
Strand: Reverse
Name: malT [H]
Synonym: NT01EI_3669
Alternate gene names: 238921517
Gene position: 3556627-3553901 (Counterclockwise)
Preceding gene: 238921527
Following gene: 238921515
Centisome position: 93.29
GC content: 60.69
Gene sequence:
>2727_bases GTGCGGGTGATTATGCTGATTCCGTCGAAATTAAGCCGTCCGGCGCGGCTGCAGACTACGGTGGTGCGAGAACATTTACT GACCAGGCTGGATGCGGCGCGCAATTACCGTCTGGTGTTGGTCAATGGTCCCGCTGGGTACGGTAAGACGACCCTGATGG CTCAGTGGGCGCAGGAGAAGACACACCTGGGCTGGTATTCACTGGATGAGAGCGACAACCAGCCGGAGCGCTTTGCCAGC TACCTGATCGCCGCCCTGCAGCAGGCTACCGGCGGCCACTGCGCTAAAAGCGAGGCGATGAGCCAGAAACACCAGTATGC CACGCTGTCTGCGCTGTTCTCCCAGCTGTTTATTGAGCTGGCCGATTGGCAGACGCCGCTGTATCTGGTGATCGATGATT ATCACCTGCTTACCCATCCTCCGTTGCATGAGGCTATGCGCTTTTTCTTGCGCCATCAGCCCGATAACCTGACCCTGTGT CTGATGTCCCGCACTCTGCCCCCGCTTGGGATCGCTAATTTGCGGGTGCGTGAGCAGCTGCTGGAGATTAATACCCGTCA GCTGGCCTTTAACCATCTTGAGGCCAGCCAGTTTTTTCATCAGCGTCTGAGTGCACCGCTGGCCGATGACGAAATGCACG CGTTATGCGATGAGGTCGAAGGCTGGCCGACGGCGCTGCAACTGATCGCGCTGTCGGCACGTCAGTCATCGGCACAGGCT CAGGCATCAGCACGCCGTCTGGCGCGCATCAACGCTACGCATCTGGCAGATTACCTGGCGGATGAGGTTTTGGACCGGGT AGATGACGATACGCGCGGCTTTCTGCTGCGGTGTTCGGCGCTGCGTTCAATGAACGACGCGTTGATCTGTGCCCTGACCG GCGAGGAGGAGGGCCAGATGCGCCTGGAGGAGCTGGAGCGGCAGGGGTTATTTATCCACCGGATGGATGGCGACGGGGAG TGGTTCTGTTTTCATCCGCTGTTCGCTCACTTTCTGCGTAGTCGCTGTCAGCGGGAGATGGCGGGTGTACTGCCGCAGCT GCATCGCCGCGCGGCGCAGGGATGGCTGGATCAGGGGTTTCCGGCAGAGGCGATCCACCACGCGCTGGCGGCCGGAGACA TGGCGCTGCTGCGCGATATTCTGCTGCAGCACGCCTGGGTGCTCTTCCACCAGAGTGAACTGGCGCTGCTGGAGTCCTGC CTGAATACCCTACCGTACGATGTGTTGATCCTGAACCCCAGTCTGGCGCTGCTGCAGGCCTGGCTGGCGCAGAGCCAGCA CCGCTACGGCGAAGTTAACACGCTGTTGGCGCGCGCCGAGCAGGAGATGGGGCTGCGCCAGATCTCGCTGGAGGCGGCGT TGCAGGCCGAATTCGATGCGCTGCGAGCCCAGGTCGCGATCAATGACGGGCGGCCACACGATGCCGAGCGCTTGGCGACC GAGGCGCTGCGCCATCTGCCGATCGGCAGCTATTACAGCCGGATTGTGAGCAGCTCCGTGCTGGGGGAGGTGCTGCACTG CAAAGGGGTTTTGGCGCGGGCGCTGCCGATGATGCAGCAGACCGAGCAGGTGGCCCGTCGCCATCAGACCTACCACTATG CTCTGTGGGCGCTGTTACAGCAGAGTGAGATCCTGATAGCCCAGGGGTTCTTGCAGGCCGCCTATGAGACTCAGGACAAG GGTTTTGAACTGGTTAACGAACAGCATCTGCAGCAGCTGCCGATGCATGAGTTTTTACTGCGTATCCGTGCCCAGGTGCT GTGGTCGTGGATGCGACTGGACGAGGCGGAGCGCGCAGCGCGCGATGGGCTGGCGGTATTGGCCAACGTTGAGCCACAGC AGCAACTACAGTGCCTGGCGCTATTGGCCACATGTTCGCTGGCGCGCGGCGATCTGGATAACGCCGGACAGCATCTGCGC CGCTGCGAAACCCTGCTGCAGGCCGGAAACTATCACAGCGACTGGCTGGTGAATACGGATAAGGCGCGGGTGATCTACTG GCAGATCACCGGCGATCGCCAGGCTGCCAGTCGCTGGTTGCTGCAGGCAGTGCGCCCGGCGGAGCCGGATAACCACTTTT TACAGGGGCAGTGGCGCAATATCGCGCGGGTTCAGATCATGCTGGGGCAGTATGATGAGGCACAGGTGGTGCTGGAGCAG CTGAACGCCTCGGCGCGTCGTCTGCGCCTGGTCAGCGATCTGAACCGTAACCTGTTGTTGAGCAACCTGCTGTATTGGCA TACGGATCGCAAGAGCGAAGCCCTGCGTGTGCTGATGGAGGCGTTGAGTCTGGCGAATCGCACCGGTTTTGTCAGCCACT TTGTCGTAGAGGGAGAGGTGATGGCCCAACAGCTGCGGCAGCTGCTGCAGCTCAATGCCCTGCCGGAGATGGAGGTGCAT CGCGCCCAGCGGATTCTGCGTGATATTAACCAGCATCATCGGCATAAGTTTGCCCATTTTGACGAGCAGTTCGTCGAGCG TTTGCTGAATCATCCCCAGGTACCGGAGCTGATCCGTACCAGTCCGCTGACTCAGCGTGAATGGCAGGTGCTGGGACTGA TCTATTCGGGCTACAGCAACGAGCAGATCGCTGATGAGCTGGCGGTGGCGTCGACCACCATTAAAACCCATATCCGCAAT CTGTATCAGAAGCTGGGGGTTGCGCACCGTCAGGAGGCCGTGCGTCAGGCACAGGATATCATGCGCCTGATGGGCTATGG GGTCTGA
Upstream 100 bases:
>100_bases CAAAATAAATAGGCGCCCATAGCGGCGATTTCTGGGGCTGGGTGCCGCTCCTGCGCGCGGGCCGGTACGGGCCGGTCGCC GAGGAGGGACACCGGAAGGG
Downstream 100 bases:
>100_bases TCAGCGCCAGATCAGCAGTACGCAGGCGGCGGTCAGCGTTCCCATGATCAGGTTAAAGGTGAACCAGGCGCGCCGGCTTT GCAGCAGGCGCCCGATCAGG
Product: transcriptional regulator MalT
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MRVIMLIPSKLSRPARLQTTVVREHLLTRLDAARNYRLVLVNGPAGYGKTTLMAQWAQEKTHLGWYSLDESDNQPERFAS YLIAALQQATGGHCAKSEAMSQKHQYATLSALFSQLFIELADWQTPLYLVIDDYHLLTHPPLHEAMRFFLRHQPDNLTLC LMSRTLPPLGIANLRVREQLLEINTRQLAFNHLEASQFFHQRLSAPLADDEMHALCDEVEGWPTALQLIALSARQSSAQA QASARRLARINATHLADYLADEVLDRVDDDTRGFLLRCSALRSMNDALICALTGEEEGQMRLEELERQGLFIHRMDGDGE WFCFHPLFAHFLRSRCQREMAGVLPQLHRRAAQGWLDQGFPAEAIHHALAAGDMALLRDILLQHAWVLFHQSELALLESC LNTLPYDVLILNPSLALLQAWLAQSQHRYGEVNTLLARAEQEMGLRQISLEAALQAEFDALRAQVAINDGRPHDAERLAT EALRHLPIGSYYSRIVSSSVLGEVLHCKGVLARALPMMQQTEQVARRHQTYHYALWALLQQSEILIAQGFLQAAYETQDK GFELVNEQHLQQLPMHEFLLRIRAQVLWSWMRLDEAERAARDGLAVLANVEPQQQLQCLALLATCSLARGDLDNAGQHLR RCETLLQAGNYHSDWLVNTDKARVIYWQITGDRQAASRWLLQAVRPAEPDNHFLQGQWRNIARVQIMLGQYDEAQVVLEQ LNASARRLRLVSDLNRNLLLSNLLYWHTDRKSEALRVLMEALSLANRTGFVSHFVVEGEVMAQQLRQLLQLNALPEMEVH RAQRILRDINQHHRHKFAHFDEQFVERLLNHPQVPELIRTSPLTQREWQVLGLIYSGYSNEQIADELAVASTTIKTHIRN LYQKLGVAHRQEAVRQAQDIMRLMGYGV
Sequences:
>Translated_908_residues MRVIMLIPSKLSRPARLQTTVVREHLLTRLDAARNYRLVLVNGPAGYGKTTLMAQWAQEKTHLGWYSLDESDNQPERFAS YLIAALQQATGGHCAKSEAMSQKHQYATLSALFSQLFIELADWQTPLYLVIDDYHLLTHPPLHEAMRFFLRHQPDNLTLC LMSRTLPPLGIANLRVREQLLEINTRQLAFNHLEASQFFHQRLSAPLADDEMHALCDEVEGWPTALQLIALSARQSSAQA QASARRLARINATHLADYLADEVLDRVDDDTRGFLLRCSALRSMNDALICALTGEEEGQMRLEELERQGLFIHRMDGDGE WFCFHPLFAHFLRSRCQREMAGVLPQLHRRAAQGWLDQGFPAEAIHHALAAGDMALLRDILLQHAWVLFHQSELALLESC LNTLPYDVLILNPSLALLQAWLAQSQHRYGEVNTLLARAEQEMGLRQISLEAALQAEFDALRAQVAINDGRPHDAERLAT EALRHLPIGSYYSRIVSSSVLGEVLHCKGVLARALPMMQQTEQVARRHQTYHYALWALLQQSEILIAQGFLQAAYETQDK GFELVNEQHLQQLPMHEFLLRIRAQVLWSWMRLDEAERAARDGLAVLANVEPQQQLQCLALLATCSLARGDLDNAGQHLR RCETLLQAGNYHSDWLVNTDKARVIYWQITGDRQAASRWLLQAVRPAEPDNHFLQGQWRNIARVQIMLGQYDEAQVVLEQ LNASARRLRLVSDLNRNLLLSNLLYWHTDRKSEALRVLMEALSLANRTGFVSHFVVEGEVMAQQLRQLLQLNALPEMEVH RAQRILRDINQHHRHKFAHFDEQFVERLLNHPQVPELIRTSPLTQREWQVLGLIYSGYSNEQIADELAVASTTIKTHIRN LYQKLGVAHRQEAVRQAQDIMRLMGYGV >Mature_908_residues MRVIMLIPSKLSRPARLQTTVVREHLLTRLDAARNYRLVLVNGPAGYGKTTLMAQWAQEKTHLGWYSLDESDNQPERFAS YLIAALQQATGGHCAKSEAMSQKHQYATLSALFSQLFIELADWQTPLYLVIDDYHLLTHPPLHEAMRFFLRHQPDNLTLC LMSRTLPPLGIANLRVREQLLEINTRQLAFNHLEASQFFHQRLSAPLADDEMHALCDEVEGWPTALQLIALSARQSSAQA QASARRLARINATHLADYLADEVLDRVDDDTRGFLLRCSALRSMNDALICALTGEEEGQMRLEELERQGLFIHRMDGDGE WFCFHPLFAHFLRSRCQREMAGVLPQLHRRAAQGWLDQGFPAEAIHHALAAGDMALLRDILLQHAWVLFHQSELALLESC LNTLPYDVLILNPSLALLQAWLAQSQHRYGEVNTLLARAEQEMGLRQISLEAALQAEFDALRAQVAINDGRPHDAERLAT EALRHLPIGSYYSRIVSSSVLGEVLHCKGVLARALPMMQQTEQVARRHQTYHYALWALLQQSEILIAQGFLQAAYETQDK GFELVNEQHLQQLPMHEFLLRIRAQVLWSWMRLDEAERAARDGLAVLANVEPQQQLQCLALLATCSLARGDLDNAGQHLR RCETLLQAGNYHSDWLVNTDKARVIYWQITGDRQAASRWLLQAVRPAEPDNHFLQGQWRNIARVQIMLGQYDEAQVVLEQ LNASARRLRLVSDLNRNLLLSNLLYWHTDRKSEALRVLMEALSLANRTGFVSHFVVEGEVMAQQLRQLLQLNALPEMEVH RAQRILRDINQHHRHKFAHFDEQFVERLLNHPQVPELIRTSPLTQREWQVLGLIYSGYSNEQIADELAVASTTIKTHIRN LYQKLGVAHRQEAVRQAQDIMRLMGYGV
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=904, Percent_Identity=70.6858407079646, Blast_Score=1292, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 103774; Mature: 103774
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIMLIPSKLSRPARLQTTVVREHLLTRLDAARNYRLVLVNGPAGYGKTTLMAQWAQEK CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHH THLGWYSLDESDNQPERFASYLIAALQQATGGHCAKSEAMSQKHQYATLSALFSQLFIEL HCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ADWQTPLYLVIDDYHLLTHPPLHEAMRFFLRHQPDNLTLCLMSRTLPPLGIANLRVREQL HCCCCCEEEEEECCHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHH LEINTRQLAFNHLEASQFFHQRLSAPLADDEMHALCDEVEGWPTALQLIALSARQSSAQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QASARRLARINATHLADYLADEVLDRVDDDTRGFLLRCSALRSMNDALICALTGEEEGQM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH RLEELERQGLFIHRMDGDGEWFCFHPLFAHFLRSRCQREMAGVLPQLHRRAAQGWLDQGF HHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAEAIHHALAAGDMALLRDILLQHAWVLFHQSELALLESCLNTLPYDVLILNPSLALLQA CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH WLAQSQHRYGEVNTLLARAEQEMGLRQISLEAALQAEFDALRAQVAINDGRPHDAERLAT HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH EALRHLPIGSYYSRIVSSSVLGEVLHCKGVLARALPMMQQTEQVARRHQTYHYALWALLQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSEILIAQGFLQAAYETQDKGFELVNEQHLQQLPMHEFLLRIRAQVLWSWMRLDEAERAA HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDGLAVLANVEPQQQLQCLALLATCSLARGDLDNAGQHLRRCETLLQAGNYHSDWLVNTD HCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECC KARVIYWQITGDRQAASRWLLQAVRPAEPDNHFLQGQWRNIARVQIMLGQYDEAQVVLEQ CCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH LNASARRLRLVSDLNRNLLLSNLLYWHTDRKSEALRVLMEALSLANRTGFVSHFVVEGEV HCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH MAQQLRQLLQLNALPEMEVHRAQRILRDINQHHRHKFAHFDEQFVERLLNHPQVPELIRT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC SPLTQREWQVLGLIYSGYSNEQIADELAVASTTIKTHIRNLYQKLGVAHRQEAVRQAQDI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH MRLMGYGV HHHHCCCC >Mature Secondary Structure MRVIMLIPSKLSRPARLQTTVVREHLLTRLDAARNYRLVLVNGPAGYGKTTLMAQWAQEK CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHH THLGWYSLDESDNQPERFASYLIAALQQATGGHCAKSEAMSQKHQYATLSALFSQLFIEL HCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ADWQTPLYLVIDDYHLLTHPPLHEAMRFFLRHQPDNLTLCLMSRTLPPLGIANLRVREQL HCCCCCEEEEEECCHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHH LEINTRQLAFNHLEASQFFHQRLSAPLADDEMHALCDEVEGWPTALQLIALSARQSSAQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH QASARRLARINATHLADYLADEVLDRVDDDTRGFLLRCSALRSMNDALICALTGEEEGQM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHH RLEELERQGLFIHRMDGDGEWFCFHPLFAHFLRSRCQREMAGVLPQLHRRAAQGWLDQGF HHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAEAIHHALAAGDMALLRDILLQHAWVLFHQSELALLESCLNTLPYDVLILNPSLALLQA CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH WLAQSQHRYGEVNTLLARAEQEMGLRQISLEAALQAEFDALRAQVAINDGRPHDAERLAT HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHH EALRHLPIGSYYSRIVSSSVLGEVLHCKGVLARALPMMQQTEQVARRHQTYHYALWALLQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSEILIAQGFLQAAYETQDKGFELVNEQHLQQLPMHEFLLRIRAQVLWSWMRLDEAERAA HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDGLAVLANVEPQQQLQCLALLATCSLARGDLDNAGQHLRRCETLLQAGNYHSDWLVNTD HCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECC KARVIYWQITGDRQAASRWLLQAVRPAEPDNHFLQGQWRNIARVQIMLGQYDEAQVVLEQ CCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH LNASARRLRLVSDLNRNLLLSNLLYWHTDRKSEALRVLMEALSLANRTGFVSHFVVEGEV HCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH MAQQLRQLLQLNALPEMEVHRAQRILRDINQHHRHKFAHFDEQFVERLLNHPQVPELIRT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC SPLTQREWQVLGLIYSGYSNEQIADELAVASTTIKTHIRNLYQKLGVAHRQEAVRQAQDI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH MRLMGYGV HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA