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The map label for this gene is ygiQ [C]

Identifier: 238921398

GI number: 238921398

Start: 3443192

End: 3445444

Strand: Reverse

Name: ygiQ [C]

Synonym: NT01EI_3542

Alternate gene names: 238921398

Gene position: 3445444-3443192 (Counterclockwise)

Preceding gene: 238921399

Following gene: 238921396

Centisome position: 90.38

GC content: 60.54

Gene sequence:

>2253_bases
ATGAGTAGTGTCAGCCTGATTCAACCGGAGCGCGATCTGTTCTCCTATACCCCTTATTGGGCCGAATGTTTCGGCACCGC
GCCTTTTTTACCGATGTCGCGTGCAGAGATGGATAAATTGGGCTGGGATAGTTGCGACATTATCATCGTGACCGGGGATG
CTTACGTGGATCATCCCAGCTTTGGCATGGCGATTGTTGGACGCATGCTGGAGGCCCAGGGGTTCCGGGTAGGCATCATC
GCCCAGCCGGACTGGACCAGCAAAGGCGATTTTATGCGTCTGGGTAAGCCGAATCTGTTTTTTGGCGTCACTGCCGGGAA
CATGGATTCGATGATTAACCGCTATACGGCCGATCGTAAGCTGCGCCACGATGACGCCTACACGCCAAACAACGAAGGCG
GCAAGCGCCCGGATCGCGCCACGCTGGTCTACAGCCAGCGCTGCAAAGAGGCTTTCAGTGATGTACCGGTGATCCTTGGG
GGGATCGAGGCCAGCCTGCGCCGTGTGGCGCATTATGACTATTGGTCGGATACGGTACGCCGCTCTGTGTTGGTGGATGC
CAAGGCGGATATGCTGATGTATGGCAATGGCGAACGCCCACTGGTCGAGGTCGCGCACCGTTTAGCAGCGGGGGAGCCCA
TCGCCTCTATCTGCGACGTGCGCAATACTGCCGTCATGCGCAAAGAGGCCCTGCCGGGCTGGAACGGGGTGGATTCAACC
CGTATTGATATGCCGGGGCGCATTGACCCTATTCCGAACCCCTACGGTGATGATTTGGCCTGCTCGCCCAAGGCTGCAGA
TGGGGCGATGCCGATCAGCGTACGCGCCCCTAAGCCAAAGCCATGGGAGAAGACCTATGTGCTGCTGCCGTCGTTTGAGA
AGGTGAAGGGCGATAAGGTGATGTATGCCCACGCCTCACGTATTTTGCACCATGAGACGAACCCCGGCTGTGCCCGTGCC
CTGATGCAGAAACATGGCGATCGCTACGTGTGGGTCAACCCACCGGCGATCCCGCTGAGCACCGAGGAGATGGACAGCGT
CTATGCGCTGCCATTCCAGCGTGTGCCGCATCCCACTTATGGCAAGGCCCGCCTGCCGGCCTATGACATGATCCGCTTCT
CCGTCAACATCATGCGCGGCTGTTACGGCGGCTGTGCCTTCTGCTCTATCACTGAGCACGAGGGCCGCATCATTCAGAGT
CGCTCTGAGGACTCCATCATTCGTGAGATCGAGGAGATCCGTGACAAGGTGCCTGGATTTACCGGTATTATCTCCGATCT
GGGCGGCCCGACCGCCAACATGTATATGTTGCGCTGCCAGTCGCCGCGTGCGGAGCAGACCTGCCGCCGTTCCTCCTGCG
TCTATCCGGATATCTGCCGCCATATGGACACCAACCATGAGCCGACCATTAAGCTCTACCGGCGCGCCCGCGATCTGCAG
GGGGTGAAGAAGATCCTGATCGCCTCCGGGGTACGTTACGATCTGGCGGTACAGGATCCGCGCTATATCAAAGAGCTGGC
CACGCATCACGTCGGCGGCTATCTGAAGATCGCGCCCGAGCATACGGAAGAGGGGCCGCTGTCCAAGATGATGAAGCCGG
GGATGGGCAGCTACTATCGCTTTAAGGAGCTTTTTGATGCCTATTCGAAGCAGGCCGGGAAAGAGCAGTACCTCATACCC
TACTTTATCTCCGCGCACCCGGGGACCCGGGATGAGGATATGGTCAATCTGGCGCTGTGGCTAAAGCAGCACCGTTTCCG
CCTCGATCAGGTGCAAAACTTCTATCCGTCACCGCTGGCCAACTCGACCACCATGTATTACACCGGCAAGAACCCGCTGG
CCAAGGTGGACTATAAGAGCGAGGATGTGGTGGTGCCGAAGGGTGAGCGCCAGCGCAGGCTACATAAGGCGCTGCTGCGC
TATCATGATCCGGCCAACTGGCCGATGATCCGCGCCGCGCTGGAGGAGATGGGGCTACAGCACCTGATCGGCAATCGTCG
CGAGTGTCTGGTGCCTGCGCCGACGCTGGAGGAGCAGCGCGCCGCGCGCCGCGGTTACCAGCGCACTATGGCGCCGGCCA
TGACCAAGCATACCGGCGCGCCTCCTCAGGGTAGCGGACGACCGGCAACGCGCGGGGCCGCGCAGCCCGCCGCCCGCCCG
GGCGGAAAGGGAAATAATGGCCGTCCTGTTCGCCCCGAAGGGCGCAACGCCCGTCCGGCGCGCCCTGCCGGGCAGGCCAA
AAAGCCGCGCTAA

Upstream 100 bases:

>100_bases
TAACCCTCACATTTCTCTGCCGTAATGCGTATAATCGCCGCCCTGATCCTGATGATTTGTTCACCAGACCTGCCTGTTTT
ATCAATACAAGAGTACCGTC

Downstream 100 bases:

>100_bases
CGCCTTTTCCGACAGCCCTGATGCCTTAGCATCAGGGCTGCGCTCACCGCCTACAGGCGCATATAGGTGGCGGGATCGGA
GCCTAATCGCTTGCCGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MSSVSLIQPERDLFSYTPYWAECFGTAPFLPMSRAEMDKLGWDSCDIIIVTGDAYVDHPSFGMAIVGRMLEAQGFRVGII
AQPDWTSKGDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPNNEGGKRPDRATLVYSQRCKEAFSDVPVILG
GIEASLRRVAHYDYWSDTVRRSVLVDAKADMLMYGNGERPLVEVAHRLAAGEPIASICDVRNTAVMRKEALPGWNGVDST
RIDMPGRIDPIPNPYGDDLACSPKAADGAMPISVRAPKPKPWEKTYVLLPSFEKVKGDKVMYAHASRILHHETNPGCARA
LMQKHGDRYVWVNPPAIPLSTEEMDSVYALPFQRVPHPTYGKARLPAYDMIRFSVNIMRGCYGGCAFCSITEHEGRIIQS
RSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRSSCVYPDICRHMDTNHEPTIKLYRRARDLQ
GVKKILIASGVRYDLAVQDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYYRFKELFDAYSKQAGKEQYLIP
YFISAHPGTRDEDMVNLALWLKQHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEDVVVPKGERQRRLHKALLR
YHDPANWPMIRAALEEMGLQHLIGNRRECLVPAPTLEEQRAARRGYQRTMAPAMTKHTGAPPQGSGRPATRGAAQPAARP
GGKGNNGRPVRPEGRNARPARPAGQAKKPR

Sequences:

>Translated_750_residues
MSSVSLIQPERDLFSYTPYWAECFGTAPFLPMSRAEMDKLGWDSCDIIIVTGDAYVDHPSFGMAIVGRMLEAQGFRVGII
AQPDWTSKGDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPNNEGGKRPDRATLVYSQRCKEAFSDVPVILG
GIEASLRRVAHYDYWSDTVRRSVLVDAKADMLMYGNGERPLVEVAHRLAAGEPIASICDVRNTAVMRKEALPGWNGVDST
RIDMPGRIDPIPNPYGDDLACSPKAADGAMPISVRAPKPKPWEKTYVLLPSFEKVKGDKVMYAHASRILHHETNPGCARA
LMQKHGDRYVWVNPPAIPLSTEEMDSVYALPFQRVPHPTYGKARLPAYDMIRFSVNIMRGCYGGCAFCSITEHEGRIIQS
RSEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRSSCVYPDICRHMDTNHEPTIKLYRRARDLQ
GVKKILIASGVRYDLAVQDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYYRFKELFDAYSKQAGKEQYLIP
YFISAHPGTRDEDMVNLALWLKQHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEDVVVPKGERQRRLHKALLR
YHDPANWPMIRAALEEMGLQHLIGNRRECLVPAPTLEEQRAARRGYQRTMAPAMTKHTGAPPQGSGRPATRGAAQPAARP
GGKGNNGRPVRPEGRNARPARPAGQAKKPR
>Mature_749_residues
SSVSLIQPERDLFSYTPYWAECFGTAPFLPMSRAEMDKLGWDSCDIIIVTGDAYVDHPSFGMAIVGRMLEAQGFRVGIIA
QPDWTSKGDFMRLGKPNLFFGVTAGNMDSMINRYTADRKLRHDDAYTPNNEGGKRPDRATLVYSQRCKEAFSDVPVILGG
IEASLRRVAHYDYWSDTVRRSVLVDAKADMLMYGNGERPLVEVAHRLAAGEPIASICDVRNTAVMRKEALPGWNGVDSTR
IDMPGRIDPIPNPYGDDLACSPKAADGAMPISVRAPKPKPWEKTYVLLPSFEKVKGDKVMYAHASRILHHETNPGCARAL
MQKHGDRYVWVNPPAIPLSTEEMDSVYALPFQRVPHPTYGKARLPAYDMIRFSVNIMRGCYGGCAFCSITEHEGRIIQSR
SEDSIIREIEEIRDKVPGFTGIISDLGGPTANMYMLRCQSPRAEQTCRRSSCVYPDICRHMDTNHEPTIKLYRRARDLQG
VKKILIASGVRYDLAVQDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYYRFKELFDAYSKQAGKEQYLIPY
FISAHPGTRDEDMVNLALWLKQHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEDVVVPKGERQRRLHKALLRY
HDPANWPMIRAALEEMGLQHLIGNRRECLVPAPTLEEQRAARRGYQRTMAPAMTKHTGAPPQGSGRPATRGAAQPAARPG
GKGNNGRPVRPEGRNARPARPAGQAKKPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=741, Percent_Identity=82.3211875843455, Blast_Score=1280, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 84169; Mature: 84038

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVSLIQPERDLFSYTPYWAECFGTAPFLPMSRAEMDKLGWDSCDIIIVTGDAYVDHPS
CCCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAIVGRMLEAQGFRVGIIAQPDWTSKGDFMRLGKPNLFFGVTAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPNNEGGKRPDRATLVYSQRCKEAFSDVPVILGGIEASLRRVAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHH
RSVLVDAKADMLMYGNGERPLVEVAHRLAAGEPIASICDVRNTAVMRKEALPGWNGVDST
HHEEEECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
RIDMPGRIDPIPNPYGDDLACSPKAADGAMPISVRAPKPKPWEKTYVLLPSFEKVKGDKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHCCCEE
MYAHASRILHHETNPGCARALMQKHGDRYVWVNPPAIPLSTEEMDSVYALPFQRVPHPTY
EEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCEEECCHHHCCCCCC
GKARLPAYDMIRFSVNIMRGCYGGCAFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPGF
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCH
TGIISDLGGPTANMYMLRCQSPRAEQTCRRSSCVYPDICRHMDTNHEPTIKLYRRARDLQ
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
GVKKILIASGVRYDLAVQDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYYR
HHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCHHHH
FKELFDAYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKQHRFRLDQVQNFYPSPLA
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NSTTMYYTGKNPLAKVDYKSEDVVVPKGERQRRLHKALLRYHDPANWPMIRAALEEMGLQ
CCEEEEEECCCCCEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
HLIGNRRECLVPAPTLEEQRAARRGYQRTMAPAMTKHTGAPPQGSGRPATRGAAQPAARP
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GGKGNNGRPVRPEGRNARPARPAGQAKKPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSVSLIQPERDLFSYTPYWAECFGTAPFLPMSRAEMDKLGWDSCDIIIVTGDAYVDHPS
CCCCCCCCCHHHHCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCC
FGMAIVGRMLEAQGFRVGIIAQPDWTSKGDFMRLGKPNLFFGVTAGNMDSMINRYTADRK
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHH
LRHDDAYTPNNEGGKRPDRATLVYSQRCKEAFSDVPVILGGIEASLRRVAHYDYWSDTVR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHH
RSVLVDAKADMLMYGNGERPLVEVAHRLAAGEPIASICDVRNTAVMRKEALPGWNGVDST
HHEEEECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
RIDMPGRIDPIPNPYGDDLACSPKAADGAMPISVRAPKPKPWEKTYVLLPSFEKVKGDKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCHHHHCCCEE
MYAHASRILHHETNPGCARALMQKHGDRYVWVNPPAIPLSTEEMDSVYALPFQRVPHPTY
EEHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCEEECCHHHCCCCCC
GKARLPAYDMIRFSVNIMRGCYGGCAFCSITEHEGRIIQSRSEDSIIREIEEIRDKVPGF
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCH
TGIISDLGGPTANMYMLRCQSPRAEQTCRRSSCVYPDICRHMDTNHEPTIKLYRRARDLQ
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
GVKKILIASGVRYDLAVQDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYYR
HHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCCHHHH
FKELFDAYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKQHRFRLDQVQNFYPSPLA
HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NSTTMYYTGKNPLAKVDYKSEDVVVPKGERQRRLHKALLRYHDPANWPMIRAALEEMGLQ
CCEEEEEECCCCCEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
HLIGNRRECLVPAPTLEEQRAARRGYQRTMAPAMTKHTGAPPQGSGRPATRGAAQPAARP
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GGKGNNGRPVRPEGRNARPARPAGQAKKPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]