Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921391
Identifier: 238921391
GI number: 238921391
Start: 3435793
End: 3436122
Strand: Reverse
Name: 238921391
Synonym: NT01EI_3535
Alternate gene names: NA
Gene position: 3436122-3435793 (Counterclockwise)
Preceding gene: 238921392
Following gene: 238921389
Centisome position: 90.13
GC content: 62.73
Gene sequence:
>330_bases ATGGTATTACGACGGCTTTCCTGGATGGTCGGCAGCGGTGCCTGGCTGATGCCCTGGGTACTGCTGCTGTGGCAGTGGTT GGAGACAGGGCAACATCAGGCGACGATCTCGCTGCAGGCCTACAACGGTTGGAGGATGACAGTGCTGCTGGCCGATACCG CCTTCGCCGGTGCACTCTCGCTGCTGGCGCTGTTGGTCGGTGCTGTAGCGCTGGCGCGAACTCCACCGGAGAAGCTGCGC CCGTTGCGGCGAATGGCGGAGCTGCCGGTGTTGGCGTTGCCGCTGCTATTCTGTCTGTTTGTCGTCGGTCTGTTCTGGGT ACACGGCTAG
Upstream 100 bases:
>100_bases CGCAGCGCGGGGCTTTTTACTATTATTGTCGCCAGAGAGCGGACACCACCCGGTATAACCGTTTCCGTAGAGACGGGCAT CATGGGATGAGGGAAAACAT
Downstream 100 bases:
>100_bases GTGACCGGGTAAACGGGCCGCCCGGTGTATCAACCTGCCGTTAGCTCGTACTTCTTTATCTTGCGGTAGAGGGTGGCAAT ACCGATACCCAGCTCCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MVLRRLSWMVGSGAWLMPWVLLLWQWLETGQHQATISLQAYNGWRMTVLLADTAFAGALSLLALLVGAVALARTPPEKLR PLRRMAELPVLALPLLFCLFVVGLFWVHG
Sequences:
>Translated_109_residues MVLRRLSWMVGSGAWLMPWVLLLWQWLETGQHQATISLQAYNGWRMTVLLADTAFAGALSLLALLVGAVALARTPPEKLR PLRRMAELPVLALPLLFCLFVVGLFWVHG >Mature_109_residues MVLRRLSWMVGSGAWLMPWVLLLWQWLETGQHQATISLQAYNGWRMTVLLADTAFAGALSLLALLVGAVALARTPPEKLR PLRRMAELPVLALPLLFCLFVVGLFWVHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12208; Mature: 12208
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRRLSWMVGSGAWLMPWVLLLWQWLETGQHQATISLQAYNGWRMTVLLADTAFAGALS CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEECHHHHHHHH LLALLVGAVALARTPPEKLRPLRRMAELPVLALPLLFCLFVVGLFWVHG HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVLRRLSWMVGSGAWLMPWVLLLWQWLETGQHQATISLQAYNGWRMTVLLADTAFAGALS CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEECHHHHHHHH LLALLVGAVALARTPPEKLRPLRRMAELPVLALPLLFCLFVVGLFWVHG HHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA