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The map label for this gene is ygeW [H]

Identifier: 238921389

GI number: 238921389

Start: 3432245

End: 3433432

Strand: Reverse

Name: ygeW [H]

Synonym: NT01EI_3533

Alternate gene names: 238921389

Gene position: 3433432-3432245 (Counterclockwise)

Preceding gene: 238921391

Following gene: 238921388

Centisome position: 90.06

GC content: 56.23

Gene sequence:

>1188_bases
ATGAAAACTGTTAATGAAATTATCAAGGATATCAACGCGCTCAAGTCTAATCTTCATGACAAGGACTTTCTGCTGACCTG
GGAGCAGAGTCCGGAGGAGCTGAAACTGGTACTGGATGTTGCCGAGGCGCTGAAGACCATGCGCGCTGAAAATATCACGA
CCAAAATCTTTAACAGCGGGCTGGGTATCTCCGTGTTCCGCGATAACTCGACCCGTACCCGTTTCTCCTATGCGTCTGCC
CTGAATCTGCTGGGGCTGGCCCAGCAGGATCTGGATGAGGGTAAATCCCAAATCGCCCACGGTGAAACCGTGCGTGAGAC
CGCCAACATGATCTCCTTCTGTGCCGATGCTATCGGTATTCGTGACGATATGTTCCTGGGCGCCGGTAACGCTTACATGC
GTGAGGTCGGCGCAGCGCTGGATGAGGGGTACGAGCAGGGTGTTCTCCCGCAGCGTCCGGCGCTGGTCAACCTGCAATGC
GACATTGACCACCCGACGCAGTCCATGGCCGATCTGGCCTGGCTGCGCGAGCATTTCGGCAGCCTGGAAAACCTGAAGGG
CAAGAAGATCGCCATGACCTGGGCCTATTCACCGAGCTATGGCAAGCCGCTGTCCGTGCCGCAGGGCATCATCGGTTTGA
TGACCCGCTTCGGGATGGATGTCACGCTGGCCCATCCGGAAGGCTATGACTTGATCCCTGATGTGGTAGAGGTCGCCCAC
AATAACGCCAAGGCGTCCGGCGGCAGCTTCCGCCAGGTGAGCTCGATGGAGGAGGCTTTCAAGGGGGCGGATATCGTTTA
TCCCAAGTCCTGGGCGCCTTACAAGGTGATGGAGCAGCGCACCGAGCTGCTGCGCGCCAATGATCACGATGGTCTGAAGG
CCCTGGAGAAACAATGTCTGGCGCAGAATGCTAACCATAAAAATTGGCACTGTACCGAAGAGATGATGAAGCTGACCCGT
GGCGGTGAAGCGCTGTATATGCACTGCCTGCCGGCCGATATCTCCGGCGTCTCCTGTAAAGAGGGTGAGGTAACTGAAGG
GGTATTCGAGAAATACCGCATCGCCACCTACAAAGAGGCCAGCTGGAAGCCATACATCATCGCCGCGATGATCGTGGCAC
GGAAATTCCCCAAACCGGGTCTGGTGTTGGATCAGCTGCTCAAGGAAGCCCAGAAGCGTATTAAGTAA

Upstream 100 bases:

>100_bases
CCAGTCGCTGTTATCGACTGTTTGCAGGCCGGAGTCTCACCGCCTGTGCGGCGTAGCAGGTTAGTCAGGTAGTCAGTCAT
TTAATCATTAGGGCCATACG

Downstream 100 bases:

>100_bases
CACTGTCGGCCGGCCGAGTGGGCCGGCCTTTCCGCCAGCGCGGATTTCTTATTCGATGGATGAGGTTGGGTTATGTCTGT
TTTCTCGCTGAAGGTGGATA

Product: aspartate/ornithine carbamoyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKTVNEIIKDINALKSNLHDKDFLLTWEQSPEELKLVLDVAEALKTMRAENITTKIFNSGLGISVFRDNSTRTRFSYASA
LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMFLGAGNAYMREVGAALDEGYEQGVLPQRPALVNLQC
DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAH
NNAKASGGSFRQVSSMEEAFKGADIVYPKSWAPYKVMEQRTELLRANDHDGLKALEKQCLAQNANHKNWHCTEEMMKLTR
GGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMIVARKFPKPGLVLDQLLKEAQKRIK

Sequences:

>Translated_395_residues
MKTVNEIIKDINALKSNLHDKDFLLTWEQSPEELKLVLDVAEALKTMRAENITTKIFNSGLGISVFRDNSTRTRFSYASA
LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMFLGAGNAYMREVGAALDEGYEQGVLPQRPALVNLQC
DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAH
NNAKASGGSFRQVSSMEEAFKGADIVYPKSWAPYKVMEQRTELLRANDHDGLKALEKQCLAQNANHKNWHCTEEMMKLTR
GGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMIVARKFPKPGLVLDQLLKEAQKRIK
>Mature_395_residues
MKTVNEIIKDINALKSNLHDKDFLLTWEQSPEELKLVLDVAEALKTMRAENITTKIFNSGLGISVFRDNSTRTRFSYASA
LNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMFLGAGNAYMREVGAALDEGYEQGVLPQRPALVNLQC
DIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAH
NNAKASGGSFRQVSSMEEAFKGADIVYPKSWAPYKVMEQRTELLRANDHDGLKALEKQCLAQNANHKNWHCTEEMMKLTR
GGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMIVARKFPKPGLVLDQLLKEAQKRIK

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=367, Percent_Identity=24.7956403269755, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI48994908, Length=395, Percent_Identity=91.3924050632911, Blast_Score=770, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002082
- InterPro:   IPR017702 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: NA

Molecular weight: Translated: 44004; Mature: 44004

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVNEIIKDINALKSNLHDKDFLLTWEQSPEELKLVLDVAEALKTMRAENITTKIFNSG
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGI
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
RDDMFLGAGNAYMREVGAALDEGYEQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFG
CCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAH
CHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
NNAKASGGSFRQVSSMEEAFKGADIVYPKSWAPYKVMEQRTELLRANDHDGLKALEKQCL
CCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
AQNANHKNWHCTEEMMKLTRGGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEA
HCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEECCC
SWKPYIIAAMIVARKFPKPGLVLDQLLKEAQKRIK
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTVNEIIKDINALKSNLHDKDFLLTWEQSPEELKLVLDVAEALKTMRAENITTKIFNSG
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGI
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
RDDMFLGAGNAYMREVGAALDEGYEQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFG
CCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAH
CHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH
NNAKASGGSFRQVSSMEEAFKGADIVYPKSWAPYKVMEQRTELLRANDHDGLKALEKQCL
CCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
AQNANHKNWHCTEEMMKLTRGGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEA
HCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHEECCC
SWKPYIIAAMIVARKFPKPGLVLDQLLKEAQKRIK
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]